PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ISY
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Gene Pathway Family Confidence Status
PITA_000001773-RA Alkaloid ISY medium pass
PITA_000002933-RA Alkaloid ISY medium pass
PITA_000002934-RA Alkaloid ISY low borderline
PITA_000017596-RA Alkaloid ISY medium pass
PITA_000022249-RA Alkaloid ISY medium pass
PITA_000024955-RA Alkaloid ISY low borderline
PITA_000033979-RA Alkaloid ISY medium pass
PITA_000034981-RA Alkaloid ISY medium pass
PITA_000034983-RA Alkaloid ISY medium pass
PITA_000036928-RA Alkaloid ISY medium pass
PITA_000042733-RA Alkaloid ISY medium pass
PITA_000045900-RA Alkaloid ISY medium pass
PITA_000047335-RA Alkaloid ISY medium pass
PITA_000048076-RA Alkaloid ISY medium pass
PITA_000048831-RA Alkaloid ISY medium pass
PITA_000048832-RA Alkaloid ISY medium pass
PITA_000051642-RA Alkaloid ISY medium pass
PITA_000052110-RA Alkaloid ISY low borderline
PITA_000052152-RA Alkaloid ISY medium pass
PITA_000052958-RA Alkaloid ISY medium pass
PITA_000055372-RA Alkaloid ISY medium pass
PITA_000056759-RA Alkaloid ISY medium pass
PITA_000062217-RA Alkaloid ISY medium pass
PITA_000063805-RA Alkaloid ISY medium pass
PITA_000063806-RA Alkaloid ISY medium pass
PITA_000065383-RA Alkaloid ISY medium pass
PITA_000072528-RA Alkaloid ISY medium pass
PITA_000072925-RA Alkaloid ISY medium pass
PITA_000075045-RA Alkaloid ISY medium pass
PITA_000080177-RA Alkaloid ISY medium pass
PITA_000081147-RA Alkaloid ISY medium pass
PITA_000081700-RA Alkaloid ISY medium pass
PITA_000083276-RA Alkaloid ISY medium pass
PITA_000084455-RA Alkaloid ISY medium pass
PITA_000086412-RA Alkaloid ISY medium pass
PITA_000096056-RA Alkaloid ISY medium pass
PITAhm_000660-RA Alkaloid ISY medium pass
PITAhm_002111-RA Alkaloid ISY medium pass