PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
PITA_000000461-RA Flavonoid FNS medium borderline
PITA_000000462-RA Flavonoid FNS medium borderline
PITA_000000609-RA Flavonoid FNS medium borderline
PITA_000002318-RA Flavonoid FNS low borderline
PITA_000004009-RA Flavonoid FNS medium borderline
PITA_000004396-RA Flavonoid FNS medium borderline
PITA_000005876-RA Flavonoid FNS medium borderline
PITA_000007756-RA Flavonoid FNS medium borderline
PITA_000008695-RA Flavonoid FNS medium borderline
PITA_000010256-RA Flavonoid FNS medium borderline
PITA_000010362-RA Flavonoid FNS medium borderline
PITA_000011385-RA Flavonoid FNS medium borderline
PITA_000013707-RA Flavonoid FNS medium borderline
PITA_000018199-RA Flavonoid FNS medium borderline
PITA_000020245-RA Flavonoid FNS medium borderline
PITA_000025735-RA Flavonoid FNS medium borderline
PITA_000025821-RA Flavonoid FNS medium borderline
PITA_000027035-RA Flavonoid FNS medium borderline
PITA_000027160-RA Flavonoid FNS medium borderline
PITA_000027540-RA Flavonoid FNS medium borderline
PITA_000028224-RA Flavonoid FNS medium borderline
PITA_000028935-RA Flavonoid FNS low borderline
PITA_000029494-RA Flavonoid FNS medium borderline
PITA_000029496-RA Flavonoid FNS medium borderline
PITA_000029796-RA Flavonoid FNS medium borderline
PITA_000030900-RA Flavonoid FNS medium borderline
PITA_000031099-RA Flavonoid FNS medium borderline
PITA_000031518-RA Flavonoid FNS medium borderline
PITA_000032929-RA Flavonoid FNS medium borderline
PITA_000033586-RA Flavonoid FNS medium borderline
PITA_000033717-RA Flavonoid FNS medium borderline
PITA_000036203-RA Flavonoid FNS medium borderline
PITA_000037777-RA Flavonoid FNS medium borderline
PITA_000038318-RA Flavonoid FNS medium borderline
PITA_000038591-RA Flavonoid FNS medium borderline
PITA_000038705-RA Flavonoid FNS medium borderline
PITA_000041890-RA Flavonoid FNS medium borderline
PITA_000043023-RA Flavonoid FNS medium borderline
PITA_000044847-RA Flavonoid FNS medium borderline
PITA_000048309-RA Flavonoid FNS medium borderline
PITA_000048874-RA Flavonoid FNS medium borderline
PITA_000049424-RA Flavonoid FNS medium borderline
PITA_000050039-RA Flavonoid FNS medium borderline
PITA_000051052-RA Flavonoid FNS low borderline
PITA_000051065-RA Flavonoid FNS medium borderline
PITA_000051217-RA Flavonoid FNS medium borderline
PITA_000053186-RA Flavonoid FNS medium pass
PITA_000053544-RA Flavonoid FNS medium borderline
PITA_000054036-RA Flavonoid FNS medium borderline
PITA_000055518-RA Flavonoid FNS medium pass