PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
1A_I11_NT_comp49445_c0_seq3|m.4479.mrna1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
1A_I3_NT_comp53258_c0_seq2|m.6566.mrna2 Terpenoid UGT medium pass UGT__00068__sp_P0DO75_GT752_SIRGR
1A_I9_VO_L_2122_T_92/101|m.12450.mrna1 Terpenoid UGT medium pass UGT__00102__sp_Q9LZD8_U89A2_ARATH
1A_all_VO_L_10621_T_8/20|m.2398.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
1A_all_VO_L_5517_T_887/930|m.2020.mrna1 Terpenoid UGT medium pass UGT__00101__sp_Q9LVR1_U72E2_ARATH
2A_I4_VO_L_831_T_41/65|m.26747.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
3A_I19_VO_L_1_T_135982/241978|m.34819.mrna1 Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
5A_I16_VO_L_3074_T_89/89|m.49426.mrna2 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
5A_I16_VO_L_4_T_65838/214906|m.48071.mrna1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
6A_I23_NT_comp44453_c0_seq2|m.58668.mrna1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
PITA_000000003-RA Terpenoid UGT medium pass UGT__00114__sp_U3THC0_FG2KI_SOYBN
PITA_000000004-RA Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
PITA_000000186-RA Terpenoid UGT low borderline UGT__00057__sp_O81498_U72E3_ARATH
PITA_000000276-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000000385-RA Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
PITA_000000672-RA Terpenoid UGT medium pass UGT__00070__sp_Q5XF20_U84A1_ARATH
PITA_000000673-RA Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
PITA_000000694-RA Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
PITA_000000941-RA Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000001275-RA Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000001285-RA Terpenoid UGT medium pass UGT__00106__sp_Q9SKC5_U74D1_ARATH
PITA_000001286-RA Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
PITA_000001287-RA Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
PITA_000001288-RA Terpenoid UGT medium pass UGT__00016__sp_A0A193AUF6_GGT23_PUNGR
PITA_000001296-RA Terpenoid UGT low borderline UGT__00108__sp_Q9SYK9_U74E2_ARATH
PITA_000001297-RA Terpenoid UGT medium pass UGT__00055__sp_O48676_U74B1_ARATH
PITA_000001299-RA Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
PITA_000001300-RA Terpenoid UGT low borderline UGT__00093__sp_Q9LR44_U75B1_ARATH
PITA_000001305-RA Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
PITA_000001645-RA Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
PITA_000002710-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000003434-RA Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
PITA_000003505-RA Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000003513-RA Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
PITA_000003789-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000004391-RA Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
PITA_000005255-RA Terpenoid UGT low borderline UGT__00111__sp_Q9ZQ99_U73C1_ARATH
PITA_000006175-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000006739-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000007027-RA Terpenoid UGT low borderline UGT__00110__sp_Q9ZQ95_U73C6_ARATH
PITA_000008221-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000009154-RA Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
PITA_000009157-RA Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
PITA_000009334-RA Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
PITA_000009396-RA Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000009397-RA Terpenoid UGT low borderline UGT__00103__sp_Q9M156_U72B1_ARATH
PITA_000010329-RA Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
PITA_000010599-RA Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
PITA_000011693-RA Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
PITA_000011696-RA Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR