PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
PITA_000000047-RA Phenylpropanoid COMT medium pass
PITA_000000285-RA Phenylpropanoid COMT medium pass
PITA_000003103-RA Phenylpropanoid COMT medium pass
PITA_000003507-RA Phenylpropanoid COMT medium pass
PITA_000004376-RA Phenylpropanoid COMT low borderline
PITA_000005315-RA Phenylpropanoid COMT low borderline
PITA_000007137-RA Phenylpropanoid COMT medium pass
PITA_000007852-RA Phenylpropanoid COMT low borderline
PITA_000010263-RA Phenylpropanoid COMT medium pass
PITA_000011008-RA Phenylpropanoid COMT medium pass
PITA_000015038-RA Phenylpropanoid COMT medium pass
PITA_000015045-RA Phenylpropanoid COMT medium pass
PITA_000015702-RA Phenylpropanoid COMT medium pass
PITA_000017881-RA Phenylpropanoid COMT medium pass
PITA_000019184-RA Phenylpropanoid COMT low borderline
PITA_000021438-RA Phenylpropanoid COMT low borderline
PITA_000021439-RA Phenylpropanoid COMT low borderline
PITA_000021792-RA Phenylpropanoid COMT low borderline
PITA_000021793-RA Phenylpropanoid COMT low borderline
PITA_000021794-RA Phenylpropanoid COMT low borderline
PITA_000021955-RA Phenylpropanoid COMT medium pass
PITA_000022625-RA Phenylpropanoid COMT low borderline
PITA_000025014-RA Phenylpropanoid COMT medium pass
PITA_000026540-RA Phenylpropanoid COMT medium pass
PITA_000026542-RA Phenylpropanoid COMT medium pass
PITA_000027503-RA Phenylpropanoid COMT low borderline
PITA_000027508-RA Phenylpropanoid COMT medium pass
PITA_000028631-RA Phenylpropanoid COMT medium pass
PITA_000030785-RA Phenylpropanoid COMT medium pass
PITA_000031828-RA Phenylpropanoid COMT medium pass
PITA_000031896-RA Phenylpropanoid COMT low borderline
PITA_000033437-RA Phenylpropanoid COMT low borderline
PITA_000033438-RA Phenylpropanoid COMT low borderline
PITA_000033941-RA Phenylpropanoid COMT medium pass
PITA_000034772-RA Phenylpropanoid COMT medium pass
PITA_000036158-RA Phenylpropanoid COMT low borderline
PITA_000037600-RA Phenylpropanoid COMT medium pass
PITA_000038391-RA Phenylpropanoid COMT low borderline
PITA_000038536-RA Phenylpropanoid COMT medium pass
PITA_000041019-RA Phenylpropanoid COMT medium pass
PITA_000041688-RA Phenylpropanoid COMT medium pass
PITA_000042183-RA Phenylpropanoid COMT medium pass
PITA_000042595-RA Phenylpropanoid COMT medium pass
PITA_000042965-RA Phenylpropanoid COMT low borderline
PITA_000043172-RA Phenylpropanoid COMT medium pass
PITA_000044814-RA Phenylpropanoid COMT medium pass
PITA_000044817-RA Phenylpropanoid COMT medium pass
PITA_000045412-RA Phenylpropanoid COMT medium pass
PITA_000046444-RA Phenylpropanoid COMT medium pass
PITA_000046559-RA Phenylpropanoid COMT medium pass