PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000083650-RA Phenylpropanoid COMT medium pass
PITA_000083651-RA Phenylpropanoid COMT low borderline
PITA_000084483-RA Phenylpropanoid COMT medium pass
PITA_000084573-RA Phenylpropanoid COMT medium pass
PITA_000086562-RA Phenylpropanoid COMT medium pass
PITA_000086737-RA Phenylpropanoid COMT medium pass
PITA_000087410-RA Phenylpropanoid COMT low borderline
PITA_000087483-RA Phenylpropanoid COMT low borderline
PITA_000087544-RA Phenylpropanoid COMT medium pass
PITA_000088120-RA Phenylpropanoid COMT medium pass
PITA_000088458-RA Phenylpropanoid COMT medium pass
PITA_000089184-RA Phenylpropanoid COMT medium pass
PITA_000089329-RA Phenylpropanoid COMT medium pass
PITA_000090398-RA Phenylpropanoid COMT medium pass
PITA_000090500-RA Phenylpropanoid COMT medium pass
PITA_000090550-RA Phenylpropanoid COMT low borderline
PITA_000091092-RA Phenylpropanoid COMT medium pass
PITA_000092208-RA Phenylpropanoid COMT medium pass
PITA_000092427-RA Phenylpropanoid COMT medium pass
PITA_000092585-RA Phenylpropanoid COMT medium pass
PITA_000092604-RA Phenylpropanoid COMT medium pass
PITA_000093079-RA Phenylpropanoid COMT medium pass
PITA_000093949-RA Phenylpropanoid COMT medium pass
PITA_000094094-RA Phenylpropanoid COMT medium pass
PITA_000094799-RA Phenylpropanoid COMT medium pass
PITA_000094913-RA Phenylpropanoid COMT medium pass
PITA_000094914-RA Phenylpropanoid COMT medium pass
PITA_000095021-RA Phenylpropanoid COMT medium pass
PITA_000095489-RA Phenylpropanoid COMT medium pass
PITA_000095825-RA Phenylpropanoid COMT medium pass
PITA_000096669-RA Phenylpropanoid COMT low borderline
PITAhm_000104-RA Phenylpropanoid COMT medium pass
PITA_000000438-RA Phenylpropanoid CSE low borderline
PITA_000000883-RA Phenylpropanoid CSE medium pass
PITA_000003880-RA Phenylpropanoid CSE low borderline
PITA_000006732-RA Phenylpropanoid CSE medium pass
PITA_000006733-RA Phenylpropanoid CSE low borderline
PITA_000008197-RA Phenylpropanoid CSE medium pass
PITA_000011168-RA Phenylpropanoid CSE medium pass
PITA_000016010-RA Phenylpropanoid CSE medium pass
PITA_000017769-RA Phenylpropanoid CSE medium pass
PITA_000023014-RA Phenylpropanoid CSE medium pass
PITA_000023015-RA Phenylpropanoid CSE low borderline
PITA_000023550-RA Phenylpropanoid CSE medium pass
PITA_000026174-RA Phenylpropanoid CSE medium pass
PITA_000031478-RA Phenylpropanoid CSE medium pass
PITA_000033730-RA Phenylpropanoid CSE medium pass
PITA_000034512-RA Phenylpropanoid CSE medium pass
PITA_000034514-RA Phenylpropanoid CSE medium pass
PITA_000036207-RA Phenylpropanoid CSE medium pass