PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000019536-RA Alkaloid 8HGO medium borderline
PITA_000019880-RA Alkaloid 8HGO medium borderline
PITA_000020525-RA Alkaloid 8HGO low borderline
PITA_000021678-RA Alkaloid 8HGO medium borderline
PITA_000022558-RA Alkaloid 8HGO medium pass
PITA_000024716-RA Alkaloid 8HGO low borderline
PITA_000027429-RA Alkaloid 8HGO medium borderline
PITA_000027430-RA Alkaloid 8HGO medium borderline
PITA_000028147-RA Alkaloid 8HGO medium borderline
PITA_000028460-RA Alkaloid 8HGO low borderline
PITA_000029636-RA Alkaloid 8HGO low borderline
PITA_000030060-RA Alkaloid 8HGO medium pass
PITA_000031292-RA Alkaloid 8HGO low borderline
PITA_000032440-RA Alkaloid 8HGO low borderline
PITA_000034877-RA Alkaloid 8HGO medium borderline
PITA_000034879-RA Alkaloid 8HGO medium borderline
PITA_000035978-RA Alkaloid 8HGO medium borderline
PITA_000038072-RA Alkaloid 8HGO low borderline
PITA_000038074-RA Alkaloid 8HGO low borderline
PITA_000039528-RA Alkaloid 8HGO low borderline
PITA_000041316-RA Alkaloid 8HGO medium borderline
PITA_000041952-RA Alkaloid 8HGO medium borderline
PITA_000042691-RA Alkaloid 8HGO low borderline
PITA_000043338-RA Alkaloid 8HGO medium borderline
PITA_000044155-RA Alkaloid 8HGO medium borderline
PITA_000046866-RA Alkaloid 8HGO medium borderline
PITA_000048401-RA Alkaloid 8HGO medium borderline
PITA_000048545-RA Alkaloid 8HGO low borderline
PITA_000050125-RA Alkaloid 8HGO medium pass
PITA_000050142-RA Alkaloid 8HGO medium borderline
PITA_000051245-RA Alkaloid 8HGO medium pass
PITA_000052427-RA Alkaloid 8HGO medium borderline
PITA_000053217-RA Alkaloid 8HGO low borderline
PITA_000053314-RA Alkaloid 8HGO medium pass
PITA_000054472-RA Alkaloid 8HGO low borderline
PITA_000054623-RA Alkaloid 8HGO low borderline
PITA_000057504-RA Alkaloid 8HGO medium borderline
PITA_000059398-RA Alkaloid 8HGO medium pass
PITA_000059950-RA Alkaloid 8HGO medium borderline
PITA_000063334-RA Alkaloid 8HGO medium borderline
PITA_000063775-RA Alkaloid 8HGO medium pass
PITA_000063814-RA Alkaloid 8HGO low borderline
PITA_000065668-RA Alkaloid 8HGO low borderline
PITA_000069072-RA Alkaloid 8HGO medium pass
PITA_000070720-RA Alkaloid 8HGO low borderline
PITA_000071353-RA Alkaloid 8HGO low borderline
PITA_000072635-RA Alkaloid 8HGO low borderline
PITA_000072650-RA Alkaloid 8HGO low borderline
PITA_000074494-RA Alkaloid 8HGO medium pass
PITA_000078177-RA Alkaloid 8HGO medium borderline