PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000088459-RA Alkaloid CODM/T6ODM medium borderline
PITA_000088837-RA Alkaloid CODM/T6ODM low borderline
PITA_000088985-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089145-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089331-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089382-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089740-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089770-RA Alkaloid CODM/T6ODM medium borderline
PITA_000089953-RA Alkaloid CODM/T6ODM medium borderline
PITA_000090060-RA Alkaloid CODM/T6ODM low borderline
PITA_000090073-RA Alkaloid CODM/T6ODM medium borderline
PITA_000090408-RA Alkaloid CODM/T6ODM medium borderline
PITA_000092827-RA Alkaloid CODM/T6ODM medium borderline
PITA_000092934-RA Alkaloid CODM/T6ODM medium borderline
PITA_000093394-RA Alkaloid CODM/T6ODM medium borderline
PITA_000093646-RA Alkaloid CODM/T6ODM medium borderline
PITA_000093760-RA Alkaloid CODM/T6ODM medium borderline
PITA_000093838-RA Alkaloid CODM/T6ODM medium borderline
PITA_000095422-RA Alkaloid CODM/T6ODM medium borderline
PITA_000095739-RA Alkaloid CODM/T6ODM medium borderline
PITA_000096356-RA Alkaloid CODM/T6ODM medium borderline
PITAhm_002085-RA Alkaloid CODM/T6ODM medium borderline
PITAhm_003069-RA Alkaloid CODM/T6ODM medium borderline
PITA_000008790-RA Alkaloid COR medium pass
PITA_000009269-RA Alkaloid COR medium pass
PITA_000010813-RA Alkaloid COR medium pass
PITA_000018499-RA Alkaloid COR medium pass
PITA_000022269-RA Alkaloid COR medium pass
PITA_000040749-RA Alkaloid COR medium pass
PITA_000040838-RA Alkaloid COR low borderline
PITA_000044241-RA Alkaloid COR medium pass
PITA_000046799-RA Alkaloid COR low borderline
PITA_000047207-RA Alkaloid COR low borderline
PITA_000051072-RA Alkaloid COR low borderline
PITA_000053422-RA Alkaloid COR low borderline
PITA_000055959-RA Alkaloid COR medium pass
PITA_000058434-RA Alkaloid COR medium pass
PITA_000064165-RA Alkaloid COR medium pass
PITA_000073879-RA Alkaloid COR medium pass
PITA_000075728-RA Alkaloid COR medium pass
PITA_000083914-RA Alkaloid COR medium pass
PITA_000083960-RA Alkaloid COR medium pass
PITA_000090117-RA Alkaloid COR low borderline
PITA_000093594-RA Alkaloid COR low borderline
PITA_000094584-RA Alkaloid COR low borderline
PITA_000007688-RA Alkaloid CYP719 medium borderline
PITA_000008353-RA Alkaloid CYP719 medium borderline
PITA_000019041-RA Alkaloid CYP719 medium pass
PITA_000019042-RA Alkaloid CYP719 medium borderline
PITA_000035717-RA Alkaloid CYP719 medium borderline