PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000025907-RA Alkaloid G8O/G8H medium borderline
PITA_000027269-RA Alkaloid G8O/G8H low borderline
PITA_000028490-RA Alkaloid G8O/G8H medium borderline
PITA_000028491-RA Alkaloid G8O/G8H medium borderline
PITA_000029494-RA Alkaloid G8O/G8H medium borderline
PITA_000029496-RA Alkaloid G8O/G8H low borderline
PITA_000029497-RA Alkaloid G8O/G8H medium pass
PITA_000029574-RA Alkaloid G8O/G8H medium borderline
PITA_000029776-RA Alkaloid G8O/G8H low borderline
PITA_000030452-RA Alkaloid G8O/G8H low borderline
PITA_000030453-RA Alkaloid G8O/G8H medium borderline
PITA_000030718-RA Alkaloid G8O/G8H low borderline
PITA_000030900-RA Alkaloid G8O/G8H medium pass
PITA_000030987-RA Alkaloid G8O/G8H low borderline
PITA_000031518-RA Alkaloid G8O/G8H medium borderline
PITA_000032929-RA Alkaloid G8O/G8H medium borderline
PITA_000032932-RA Alkaloid G8O/G8H medium borderline
PITA_000032933-RA Alkaloid G8O/G8H medium borderline
PITA_000032934-RA Alkaloid G8O/G8H low borderline
PITA_000033587-RA Alkaloid G8O/G8H medium borderline
PITA_000033717-RA Alkaloid G8O/G8H medium borderline
PITA_000034043-RA Alkaloid G8O/G8H low borderline
PITA_000035716-RA Alkaloid G8O/G8H low borderline
PITA_000036390-RA Alkaloid G8O/G8H low borderline
PITA_000037777-RA Alkaloid G8O/G8H medium borderline
PITA_000038591-RA Alkaloid G8O/G8H low borderline
PITA_000038705-RA Alkaloid G8O/G8H medium borderline
PITA_000038706-RA Alkaloid G8O/G8H medium borderline
PITA_000038920-RA Alkaloid G8O/G8H medium borderline
PITA_000039712-RA Alkaloid G8O/G8H medium borderline
PITA_000039713-RA Alkaloid G8O/G8H low borderline
PITA_000040627-RA Alkaloid G8O/G8H low borderline
PITA_000044322-RA Alkaloid G8O/G8H low borderline
PITA_000044847-RA Alkaloid G8O/G8H medium borderline
PITA_000045298-RA Alkaloid G8O/G8H medium borderline
PITA_000045701-RA Alkaloid G8O/G8H medium borderline
PITA_000046263-RA Alkaloid G8O/G8H low borderline
PITA_000047689-RA Alkaloid G8O/G8H low borderline
PITA_000047815-RA Alkaloid G8O/G8H low borderline
PITA_000047962-RA Alkaloid G8O/G8H medium borderline
PITA_000048611-RA Alkaloid G8O/G8H low borderline
PITA_000048612-RA Alkaloid G8O/G8H medium pass
PITA_000049425-RA Alkaloid G8O/G8H medium borderline
PITA_000050039-RA Alkaloid G8O/G8H medium pass
PITA_000050805-RA Alkaloid G8O/G8H low borderline
PITA_000051437-RA Alkaloid G8O/G8H low borderline
PITA_000051669-RA Alkaloid G8O/G8H low borderline
PITA_000051675-RA Alkaloid G8O/G8H medium borderline
PITA_000051869-RA Alkaloid G8O/G8H medium borderline
PITA_000052275-RA Alkaloid G8O/G8H low borderline