PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000084833-RA Alkaloid G8O/G8H medium borderline
PITA_000086445-RA Alkaloid G8O/G8H low borderline
PITA_000086846-RA Alkaloid G8O/G8H low borderline
PITA_000086848-RA Alkaloid G8O/G8H low borderline
PITA_000087122-RA Alkaloid G8O/G8H medium borderline
PITA_000087463-RA Alkaloid G8O/G8H medium borderline
PITA_000088153-RA Alkaloid G8O/G8H low borderline
PITA_000088290-RA Alkaloid G8O/G8H medium borderline
PITA_000088292-RA Alkaloid G8O/G8H low borderline
PITA_000088609-RA Alkaloid G8O/G8H medium borderline
PITA_000089082-RA Alkaloid G8O/G8H low borderline
PITA_000089206-RA Alkaloid G8O/G8H low borderline
PITA_000089328-RA Alkaloid G8O/G8H medium borderline
PITA_000089482-RA Alkaloid G8O/G8H medium borderline
PITA_000089674-RA Alkaloid G8O/G8H low borderline
PITA_000089858-RA Alkaloid G8O/G8H medium pass
PITA_000090506-RA Alkaloid G8O/G8H low borderline
PITA_000090537-RA Alkaloid G8O/G8H medium borderline
PITA_000091032-RA Alkaloid G8O/G8H low borderline
PITA_000091262-RA Alkaloid G8O/G8H medium borderline
PITA_000091299-RA Alkaloid G8O/G8H low borderline
PITA_000091837-RA Alkaloid G8O/G8H low borderline
PITA_000091853-RA Alkaloid G8O/G8H medium borderline
PITA_000091868-RA Alkaloid G8O/G8H medium borderline
PITA_000092084-RA Alkaloid G8O/G8H medium borderline
PITA_000092288-RA Alkaloid G8O/G8H low borderline
PITA_000092306-RA Alkaloid G8O/G8H low borderline
PITA_000092882-RA Alkaloid G8O/G8H medium borderline
PITA_000092926-RA Alkaloid G8O/G8H medium borderline
PITA_000093010-RA Alkaloid G8O/G8H medium borderline
PITA_000093074-RA Alkaloid G8O/G8H medium borderline
PITA_000093135-RA Alkaloid G8O/G8H medium borderline
PITA_000093489-RA Alkaloid G8O/G8H medium borderline
PITA_000093733-RA Alkaloid G8O/G8H medium borderline
PITA_000093955-RA Alkaloid G8O/G8H medium borderline
PITA_000094249-RA Alkaloid G8O/G8H medium borderline
PITA_000094696-RA Alkaloid G8O/G8H medium borderline
PITA_000095118-RA Alkaloid G8O/G8H medium pass
PITA_000095405-RA Alkaloid G8O/G8H low borderline
PITA_000095429-RA Alkaloid G8O/G8H low borderline
PITA_000095733-RA Alkaloid G8O/G8H low borderline
PITA_000095736-RA Alkaloid G8O/G8H medium borderline
PITA_000096080-RA Alkaloid G8O/G8H medium borderline
PITA_000096128-RA Alkaloid G8O/G8H medium borderline
PITAhm_001091-RA Alkaloid G8O/G8H medium borderline
6A_all_NT_comp98769_c1_seq9|m.51850.mrna1 Alkaloid GES low borderline
PITA_000000406-RA Alkaloid GES medium pass
PITA_000000411-RA Alkaloid GES medium pass
PITA_000000412-RA Alkaloid GES medium pass
PITA_000000413-RA Alkaloid GES low borderline