PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000074261-RA Alkaloid SGD medium pass
PITA_000075332-RA Alkaloid SGD low borderline
PITA_000075901-RA Alkaloid SGD medium pass
PITA_000076245-RA Alkaloid SGD medium pass
PITA_000076560-RA Alkaloid SGD medium pass
PITA_000076912-RA Alkaloid SGD medium pass
PITA_000077771-RA Alkaloid SGD low borderline
PITA_000077925-RA Alkaloid SGD low borderline
PITA_000078367-RA Alkaloid SGD medium pass
PITA_000079964-RA Alkaloid SGD medium pass
PITA_000080220-RA Alkaloid SGD medium pass
PITA_000080588-RA Alkaloid SGD low borderline
PITA_000080741-RA Alkaloid SGD medium pass
PITA_000081097-RA Alkaloid SGD low borderline
PITA_000081176-RA Alkaloid SGD medium pass
PITA_000083600-RA Alkaloid SGD low borderline
PITA_000083680-RA Alkaloid SGD low borderline
PITA_000084784-RA Alkaloid SGD medium pass
PITA_000085058-RA Alkaloid SGD medium pass
PITA_000085088-RA Alkaloid SGD medium pass
PITA_000085402-RA Alkaloid SGD low borderline
PITA_000085413-RA Alkaloid SGD medium pass
PITA_000086236-RA Alkaloid SGD medium pass
PITA_000086314-RA Alkaloid SGD medium pass
PITA_000086759-RA Alkaloid SGD low borderline
PITA_000087534-RA Alkaloid SGD medium pass
PITA_000088618-RA Alkaloid SGD medium pass
PITA_000089597-RA Alkaloid SGD medium pass
PITA_000090623-RA Alkaloid SGD low borderline
PITA_000091706-RA Alkaloid SGD medium pass
PITA_000092019-RA Alkaloid SGD low borderline
PITA_000092365-RA Alkaloid SGD low borderline
PITA_000094741-RA Alkaloid SGD low borderline
PITA_000095546-RA Alkaloid SGD medium pass
PITA_000095753-RA Alkaloid SGD medium pass
PITA_000096311-RA Alkaloid SGD medium pass
PITAhm_000672-RA Alkaloid SGD medium pass
PITAhm_000973-RA Alkaloid SGD medium pass
PITAhm_001933-RA Alkaloid SGD medium pass
PITAhm_002353-RA Alkaloid SGD low borderline
PITAhm_002399-RA Alkaloid SGD medium pass
PITAhm_003242-RA Alkaloid SGD medium pass
5A_all_NT_comp98714_c0_seq3|m.38113.mrna1 Alkaloid SLS medium borderline
PITA_000000394-RA Alkaloid SLS low borderline
PITA_000002319-RA Alkaloid SLS low borderline
PITA_000006102-RA Alkaloid SLS medium borderline
PITA_000007289-RA Alkaloid SLS medium borderline
PITA_000007888-RA Alkaloid SLS medium borderline
PITA_000008973-RA Alkaloid SLS medium borderline
PITA_000011385-RA Alkaloid SLS low borderline