PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000077638-RA Alkaloid SLS medium borderline
PITA_000080311-RA Alkaloid SLS medium pass
PITA_000080867-RA Alkaloid SLS medium borderline
PITA_000081075-RA Alkaloid SLS medium pass
PITA_000081366-RA Alkaloid SLS medium borderline
PITA_000081737-RA Alkaloid SLS medium borderline
PITA_000082065-RA Alkaloid SLS low borderline
PITA_000082543-RA Alkaloid SLS medium borderline
PITA_000086687-RA Alkaloid SLS medium borderline
PITA_000090045-RA Alkaloid SLS medium borderline
PITA_000090772-RA Alkaloid SLS medium borderline
PITA_000090783-RA Alkaloid SLS medium borderline
PITA_000090860-RA Alkaloid SLS medium borderline
PITA_000091378-RA Alkaloid SLS medium borderline
PITA_000092539-RA Alkaloid SLS low borderline
PITAhm_001415-RA Alkaloid SLS medium borderline
PITAhm_003130-RA Alkaloid SLS low borderline
1A_I3_VO_L_4085_T_11/15|m.8084.mrna1 Alkaloid STR low borderline
PITA_000000671-RA Alkaloid STR low borderline
PITA_000000963-RA Alkaloid STR medium pass
PITA_000002543-RA Alkaloid STR low borderline
PITA_000005782-RA Alkaloid STR low borderline
PITA_000006188-RA Alkaloid STR low borderline
PITA_000006191-RA Alkaloid STR low borderline
PITA_000008712-RA Alkaloid STR low borderline
PITA_000008883-RA Alkaloid STR low borderline
PITA_000009445-RA Alkaloid STR low borderline
PITA_000011502-RA Alkaloid STR low borderline
PITA_000011505-RA Alkaloid STR low borderline
PITA_000011676-RA Alkaloid STR low borderline
PITA_000012869-RA Alkaloid STR medium pass
PITA_000013103-RA Alkaloid STR low borderline
PITA_000013426-RA Alkaloid STR low borderline
PITA_000014958-RA Alkaloid STR low borderline
PITA_000016244-RA Alkaloid STR low borderline
PITA_000016602-RA Alkaloid STR low borderline
PITA_000016941-RA Alkaloid STR low borderline
PITA_000017588-RA Alkaloid STR low borderline
PITA_000021533-RA Alkaloid STR low borderline
PITA_000022109-RA Alkaloid STR medium pass
PITA_000023087-RA Alkaloid STR medium pass
PITA_000023224-RA Alkaloid STR low borderline
PITA_000023300-RA Alkaloid STR low borderline
PITA_000023998-RA Alkaloid STR low borderline
PITA_000024298-RA Alkaloid STR low borderline
PITA_000024481-RA Alkaloid STR low borderline
PITA_000026986-RA Alkaloid STR low borderline
PITA_000027572-RA Alkaloid STR medium pass
PITA_000028799-RA Alkaloid STR medium pass
PITA_000030804-RA Alkaloid STR medium pass