PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000044263-RA Flavonoid ANR medium borderline
PITA_000044264-RA Flavonoid ANR medium borderline
PITA_000045255-RA Flavonoid ANR medium pass
PITA_000045897-RA Flavonoid ANR medium borderline
PITA_000047388-RA Flavonoid ANR medium borderline
PITA_000051225-RA Flavonoid ANR low borderline
PITA_000051398-RA Flavonoid ANR medium pass
PITA_000054918-RA Flavonoid ANR medium borderline
PITA_000055104-RA Flavonoid ANR low borderline
PITA_000055403-RA Flavonoid ANR medium borderline
PITA_000056542-RA Flavonoid ANR medium borderline
PITA_000057627-RA Flavonoid ANR low borderline
PITA_000057915-RA Flavonoid ANR medium borderline
PITA_000058139-RA Flavonoid ANR low borderline
PITA_000060431-RA Flavonoid ANR low borderline
PITA_000060433-RA Flavonoid ANR medium pass
PITA_000062962-RA Flavonoid ANR medium borderline
PITA_000063219-RA Flavonoid ANR low borderline
PITA_000063263-RA Flavonoid ANR medium pass
PITA_000063913-RA Flavonoid ANR medium borderline
PITA_000068488-RA Flavonoid ANR medium borderline
PITA_000069565-RA Flavonoid ANR medium borderline
PITA_000070509-RA Flavonoid ANR medium pass
PITA_000070676-RA Flavonoid ANR medium pass
PITA_000071597-RA Flavonoid ANR low borderline
PITA_000072203-RA Flavonoid ANR medium borderline
PITA_000072406-RA Flavonoid ANR medium borderline
PITA_000082988-RA Flavonoid ANR medium borderline
PITA_000084015-RA Flavonoid ANR medium borderline
PITA_000084659-RA Flavonoid ANR medium borderline
PITA_000086473-RA Flavonoid ANR low borderline
PITA_000087769-RA Flavonoid ANR medium borderline
PITA_000088562-RA Flavonoid ANR medium borderline
PITA_000090836-RA Flavonoid ANR medium borderline
PITA_000091590-RA Flavonoid ANR medium borderline
PITA_000091771-RA Flavonoid ANR medium borderline
PITA_000093193-RA Flavonoid ANR low borderline
PITA_000093713-RA Flavonoid ANR medium borderline
PITAhm_001141-RA Flavonoid ANR low borderline
PITAhm_001717-RA Flavonoid ANR medium borderline
PITAhm_001752-RA Flavonoid ANR medium borderline
PITA_000000222-RA Flavonoid ANS/LDOX low borderline
PITA_000001661-RA Flavonoid ANS/LDOX medium pass
PITA_000002509-RA Flavonoid ANS/LDOX medium borderline
PITA_000002510-RA Flavonoid ANS/LDOX medium pass
PITA_000005097-RA Flavonoid ANS/LDOX medium borderline
PITA_000005982-RA Flavonoid ANS/LDOX low borderline
PITA_000006295-RA Flavonoid ANS/LDOX medium pass
PITA_000007494-RA Flavonoid ANS/LDOX medium pass
PITA_000008291-RA Flavonoid ANS/LDOX low borderline