PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000080525-RA Flavonoid ANS/LDOX medium borderline
PITA_000081762-RA Flavonoid ANS/LDOX medium borderline
PITA_000083096-RA Flavonoid ANS/LDOX medium pass
PITA_000084076-RA Flavonoid ANS/LDOX medium borderline
PITA_000084737-RA Flavonoid ANS/LDOX medium borderline
PITA_000085828-RA Flavonoid ANS/LDOX medium pass
PITA_000087712-RA Flavonoid ANS/LDOX medium pass
PITA_000089271-RA Flavonoid ANS/LDOX medium pass
PITA_000089740-RA Flavonoid ANS/LDOX low borderline
PITA_000089770-RA Flavonoid ANS/LDOX medium borderline
PITA_000093646-RA Flavonoid ANS/LDOX medium borderline
PITA_000093760-RA Flavonoid ANS/LDOX medium borderline
PITA_000094467-RA Flavonoid ANS/LDOX medium borderline
PITA_000095422-RA Flavonoid ANS/LDOX medium borderline
PITA_000000899-RA Flavonoid C4H medium borderline
PITA_000001426-RA Flavonoid C4H low borderline
PITA_000007972-RA Flavonoid C4H medium borderline
PITA_000009197-RA Flavonoid C4H low borderline
PITA_000019040-RA Flavonoid C4H medium borderline
PITA_000025417-RA Flavonoid C4H medium pass
PITA_000029497-RA Flavonoid C4H low borderline
PITA_000029638-RA Flavonoid C4H low borderline
PITA_000031376-RA Flavonoid C4H medium borderline
PITA_000032079-RA Flavonoid C4H medium borderline
PITA_000052144-RA Flavonoid C4H medium borderline
PITA_000057405-RA Flavonoid C4H medium borderline
PITA_000058705-RA Flavonoid C4H low borderline
PITA_000065148-RA Flavonoid C4H low borderline
PITA_000065196-RA Flavonoid C4H low borderline
PITA_000065709-RA Flavonoid C4H medium pass
PITA_000068974-RA Flavonoid C4H low borderline
PITA_000071640-RA Flavonoid C4H low borderline
PITA_000072351-RA Flavonoid C4H medium pass
PITA_000077664-RA Flavonoid C4H medium borderline
PITA_000082129-RA Flavonoid C4H low borderline
PITA_000088153-RA Flavonoid C4H low borderline
PITA_000089206-RA Flavonoid C4H low borderline
PITA_000094808-RA Flavonoid C4H low borderline
PITA_000001781-RA Flavonoid CHI medium pass
PITA_000008855-RA Flavonoid CHI medium pass
PITA_000010201-RA Flavonoid CHI medium pass
PITA_000015741-RA Flavonoid CHI medium pass
PITA_000019617-RA Flavonoid CHI low borderline
PITA_000034482-RA Flavonoid CHI medium pass
PITA_000034483-RA Flavonoid CHI medium pass
PITA_000041920-RA Flavonoid CHI low borderline
PITA_000047670-RA Flavonoid CHI low borderline
PITA_000052590-RA Flavonoid CHI medium pass
PITA_000053350-RA Flavonoid CHI low borderline
PITA_000056281-RA Flavonoid CHI medium pass