PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000067087-RA Flavonoid CHS medium pass
PITA_000067288-RA Flavonoid CHS medium pass
PITA_000067302-RA Flavonoid CHS medium pass
PITA_000071359-RA Flavonoid CHS medium pass
PITA_000075318-RA Flavonoid CHS low borderline
PITA_000075512-RA Flavonoid CHS medium pass
PITA_000075689-RA Flavonoid CHS medium pass
PITA_000076871-RA Flavonoid CHS medium pass
PITA_000078793-RA Flavonoid CHS medium pass
PITA_000079653-RA Flavonoid CHS low borderline
PITA_000079654-RA Flavonoid CHS medium pass
PITA_000083105-RA Flavonoid CHS medium pass
PITA_000085425-RA Flavonoid CHS medium pass
PITA_000086354-RA Flavonoid CHS medium pass
PITA_000087392-RA Flavonoid CHS medium pass
PITA_000087660-RA Flavonoid CHS medium pass
PITA_000087677-RA Flavonoid CHS medium pass
PITA_000087953-RA Flavonoid CHS medium pass
PITA_000088121-RA Flavonoid CHS medium pass
PITA_000090763-RA Flavonoid CHS medium pass
PITA_000091057-RA Flavonoid CHS medium pass
PITA_000091058-RA Flavonoid CHS medium pass
PITA_000091214-RA Flavonoid CHS medium pass
PITA_000091764-RA Flavonoid CHS medium pass
PITA_000092808-RA Flavonoid CHS medium pass
PITA_000093708-RA Flavonoid CHS medium pass
PITA_000094990-RA Flavonoid CHS medium pass
PITA_000095618-RA Flavonoid CHS medium pass
PITA_000096110-RA Flavonoid CHS medium pass
1A_I3_VO_L_1_T_83782/136734|m.7084.mrna1 Flavonoid DFR medium borderline
1A_all_VO_L_2_T_4417/51331|m.1073.mrna2 Flavonoid DFR medium borderline
2A_I13_VO_L_3956_T_33/40|m.20534.mrna1 Flavonoid DFR medium borderline
3A_I19_VO_L_5202_T_8/25|m.35701.mrna1 Flavonoid DFR low borderline
5A_I15_VO_L_41045_T_8/9|m.47402.mrna2 Flavonoid DFR medium borderline
PITA_000000613-RA Flavonoid DFR low borderline
PITA_000001759-RA Flavonoid DFR medium pass
PITA_000001900-RA Flavonoid DFR medium borderline
PITA_000002703-RA Flavonoid DFR medium pass
PITA_000002709-RA Flavonoid DFR medium pass
PITA_000003222-RA Flavonoid DFR high pass
PITA_000005288-RA Flavonoid DFR medium borderline
PITA_000012165-RA Flavonoid DFR medium borderline
PITA_000012858-RA Flavonoid DFR medium borderline
PITA_000012859-RA Flavonoid DFR medium borderline
PITA_000014273-RA Flavonoid DFR medium borderline
PITA_000015394-RA Flavonoid DFR low borderline
PITA_000015398-RA Flavonoid DFR medium borderline
PITA_000019132-RA Flavonoid DFR medium borderline
PITA_000019887-RA Flavonoid DFR low borderline
PITA_000019889-RA Flavonoid DFR medium borderline