PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
PITA_000056390-RA Flavonoid F3H medium borderline
PITA_000056466-RA Flavonoid F3H medium pass
PITA_000056958-RA Flavonoid F3H medium borderline
PITA_000057745-RA Flavonoid F3H medium borderline
PITA_000058095-RA Flavonoid F3H medium borderline
PITA_000058451-RA Flavonoid F3H medium borderline
PITA_000058756-RA Flavonoid F3H medium borderline
PITA_000058757-RA Flavonoid F3H low borderline
PITA_000058937-RA Flavonoid F3H medium borderline
PITA_000058977-RA Flavonoid F3H medium borderline
PITA_000059220-RA Flavonoid F3H medium borderline
PITA_000059481-RA Flavonoid F3H medium borderline
PITA_000059640-RA Flavonoid F3H medium borderline
PITA_000060428-RA Flavonoid F3H low borderline
PITA_000061487-RA Flavonoid F3H medium borderline
PITA_000061533-RA Flavonoid F3H medium borderline
PITA_000061830-RA Flavonoid F3H low borderline
PITA_000061987-RA Flavonoid F3H medium borderline
PITA_000061988-RA Flavonoid F3H medium borderline
PITA_000062107-RA Flavonoid F3H medium borderline
PITA_000062230-RA Flavonoid F3H medium borderline
PITA_000062499-RA Flavonoid F3H medium borderline
PITA_000062501-RA Flavonoid F3H medium borderline
PITA_000062741-RA Flavonoid F3H low borderline
PITA_000062989-RA Flavonoid F3H medium borderline
PITA_000063189-RA Flavonoid F3H medium borderline
PITA_000063247-RA Flavonoid F3H low borderline
PITA_000063605-RA Flavonoid F3H medium borderline
PITA_000063853-RA Flavonoid F3H low borderline
PITA_000064233-RA Flavonoid F3H medium borderline
PITA_000064413-RA Flavonoid F3H medium borderline
PITA_000064959-RA Flavonoid F3H medium borderline
PITA_000065976-RA Flavonoid F3H medium borderline
PITA_000066746-RA Flavonoid F3H medium borderline
PITA_000067283-RA Flavonoid F3H medium borderline
PITA_000068472-RA Flavonoid F3H low borderline
PITA_000068730-RA Flavonoid F3H medium borderline
PITA_000068748-RA Flavonoid F3H medium borderline
PITA_000069032-RA Flavonoid F3H medium borderline
PITA_000069358-RA Flavonoid F3H medium borderline
PITA_000069907-RA Flavonoid F3H medium borderline
PITA_000071959-RA Flavonoid F3H medium pass
PITA_000072248-RA Flavonoid F3H medium borderline
PITA_000072371-RA Flavonoid F3H medium borderline
PITA_000072558-RA Flavonoid F3H low borderline
PITA_000072931-RA Flavonoid F3H medium borderline
PITA_000073206-RA Flavonoid F3H medium borderline
PITA_000073613-RA Flavonoid F3H medium borderline
PITA_000073857-RA Flavonoid F3H low borderline
PITA_000074339-RA Flavonoid F3H low borderline