PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000037271-RA Alkaloid 7DLGT medium pass
PITA_000037272-RA Alkaloid 7DLGT medium pass
PITA_000037441-RA Alkaloid 7DLGT low borderline
PITA_000037606-RA Alkaloid 7DLGT low borderline
PITA_000037701-RA Alkaloid 7DLGT high pass
PITA_000037702-RA Alkaloid 7DLGT medium pass
PITA_000037801-RA Alkaloid 7DLGT low borderline
PITA_000037873-RA Alkaloid 7DLGT medium pass
PITA_000037876-RA Alkaloid 7DLGT low borderline
PITA_000038617-RA Alkaloid 7DLGT low borderline
PITA_000038781-RA Alkaloid 7DLGT low borderline
PITA_000039036-RA Alkaloid 7DLGT low borderline
PITA_000039377-RA Alkaloid 7DLGT medium pass
PITA_000040037-RA Alkaloid 7DLGT low borderline
PITA_000040038-RA Alkaloid 7DLGT low borderline
PITA_000040823-RA Alkaloid 7DLGT low borderline
PITA_000040888-RA Alkaloid 7DLGT medium pass
PITA_000041634-RA Alkaloid 7DLGT medium pass
PITA_000041635-RA Alkaloid 7DLGT medium pass
PITA_000041820-RA Alkaloid 7DLGT high pass
PITA_000041824-RA Alkaloid 7DLGT medium pass
PITA_000041826-RA Alkaloid 7DLGT low borderline
PITA_000041827-RA Alkaloid 7DLGT medium pass
PITA_000042432-RA Alkaloid 7DLGT low borderline
PITA_000042502-RA Alkaloid 7DLGT low borderline
PITA_000042519-RA Alkaloid 7DLGT low borderline
PITA_000042569-RA Alkaloid 7DLGT low borderline
PITA_000042571-RA Alkaloid 7DLGT medium pass
PITA_000042786-RA Alkaloid 7DLGT medium pass
PITA_000042996-RA Alkaloid 7DLGT low borderline
PITA_000044057-RA Alkaloid 7DLGT medium pass
PITA_000044282-RA Alkaloid 7DLGT low borderline
PITA_000044319-RA Alkaloid 7DLGT low borderline
PITA_000044820-RA Alkaloid 7DLGT low borderline
PITA_000044838-RA Alkaloid 7DLGT high pass
PITA_000044846-RA Alkaloid 7DLGT low borderline
PITA_000044876-RA Alkaloid 7DLGT medium pass
PITA_000045204-RA Alkaloid 7DLGT low borderline
PITA_000045495-RA Alkaloid 7DLGT medium pass
PITA_000045512-RA Alkaloid 7DLGT medium pass
PITA_000045755-RA Alkaloid 7DLGT low borderline
PITA_000045977-RA Alkaloid 7DLGT low borderline
PITA_000045993-RA Alkaloid 7DLGT low borderline
PITA_000046391-RA Alkaloid 7DLGT high pass
PITA_000046625-RA Alkaloid 7DLGT high pass
PITA_000046766-RA Alkaloid 7DLGT medium pass
PITA_000047044-RA Alkaloid 7DLGT medium pass
PITA_000047045-RA Alkaloid 7DLGT low borderline
PITA_000047582-RA Alkaloid 7DLGT high pass
PITA_000047788-RA Alkaloid 7DLGT low borderline