PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
Reset
Protein/Isoform Record Pathway Family Confidence Status
PITA_000058551-RA Alkaloid 7DLGT medium pass
PITA_000058552-RA Alkaloid 7DLGT low borderline
PITA_000058653-RA Alkaloid 7DLGT medium pass
PITA_000058878-RA Alkaloid 7DLGT medium pass
PITA_000058903-RA Alkaloid 7DLGT medium pass
PITA_000059070-RA Alkaloid 7DLGT low borderline
PITA_000059084-RA Alkaloid 7DLGT medium pass
PITA_000059134-RA Alkaloid 7DLGT medium pass
PITA_000059314-RA Alkaloid 7DLGT medium pass
PITA_000059495-RA Alkaloid 7DLGT low borderline
PITA_000059565-RA Alkaloid 7DLGT low borderline
PITA_000060619-RA Alkaloid 7DLGT low borderline
PITA_000060677-RA Alkaloid 7DLGT low borderline
PITA_000060868-RA Alkaloid 7DLGT medium pass
PITA_000060989-RA Alkaloid 7DLGT low borderline
PITA_000061063-RA Alkaloid 7DLGT medium pass
PITA_000061110-RA Alkaloid 7DLGT low borderline
PITA_000061834-RA Alkaloid 7DLGT low borderline
PITA_000062108-RA Alkaloid 7DLGT medium pass
PITA_000062175-RA Alkaloid 7DLGT medium pass
PITA_000062214-RA Alkaloid 7DLGT medium pass
PITA_000062315-RA Alkaloid 7DLGT medium pass
PITA_000062317-RA Alkaloid 7DLGT low borderline
PITA_000062697-RA Alkaloid 7DLGT low borderline
PITA_000063382-RA Alkaloid 7DLGT low borderline
PITA_000063760-RA Alkaloid 7DLGT high pass
PITA_000063776-RA Alkaloid 7DLGT low borderline
PITA_000064317-RA Alkaloid 7DLGT medium pass
PITA_000064318-RA Alkaloid 7DLGT medium pass
PITA_000065023-RA Alkaloid 7DLGT medium pass
PITA_000065094-RA Alkaloid 7DLGT medium pass
PITA_000065144-RA Alkaloid 7DLGT medium pass
PITA_000065208-RA Alkaloid 7DLGT low borderline
PITA_000065233-RA Alkaloid 7DLGT low borderline
PITA_000065409-RA Alkaloid 7DLGT high pass
PITA_000065592-RA Alkaloid 7DLGT low borderline
PITA_000065607-RA Alkaloid 7DLGT low borderline
PITA_000065723-RA Alkaloid 7DLGT medium pass
PITA_000065823-RA Alkaloid 7DLGT low borderline
PITA_000066465-RA Alkaloid 7DLGT medium pass
PITA_000066478-RA Alkaloid 7DLGT medium pass
PITA_000066630-RA Alkaloid 7DLGT low borderline
PITA_000066973-RA Alkaloid 7DLGT low borderline
PITA_000067002-RA Alkaloid 7DLGT medium pass
PITA_000067043-RA Alkaloid 7DLGT medium pass
PITA_000067372-RA Alkaloid 7DLGT low borderline
PITA_000067768-RA Alkaloid 7DLGT low borderline
PITA_000068190-RA Alkaloid 7DLGT medium pass
PITA_000068369-RA Alkaloid 7DLGT low borderline
PITA_000068446-RA Alkaloid 7DLGT low borderline