PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
PITA_000001150-RA Alkaloid 7DLH low borderline
PITA_000005076-RA Alkaloid 7DLH medium borderline
PITA_000006812-RA Alkaloid 7DLH low borderline
PITA_000007754-RA Alkaloid 7DLH medium borderline
PITA_000007873-RA Alkaloid 7DLH low borderline
PITA_000012074-RA Alkaloid 7DLH low borderline
PITA_000019034-RA Alkaloid 7DLH medium borderline
PITA_000020567-RA Alkaloid 7DLH low borderline
PITA_000020637-RA Alkaloid 7DLH medium borderline
PITA_000021538-RA Alkaloid 7DLH medium borderline
PITA_000022145-RA Alkaloid 7DLH medium borderline
PITA_000022477-RA Alkaloid 7DLH low borderline
PITA_000025223-RA Alkaloid 7DLH medium borderline
PITA_000025496-RA Alkaloid 7DLH low borderline
PITA_000025795-RA Alkaloid 7DLH low borderline
PITA_000026664-RA Alkaloid 7DLH medium borderline
PITA_000026798-RA Alkaloid 7DLH medium borderline
PITA_000028335-RA Alkaloid 7DLH medium borderline
PITA_000030252-RA Alkaloid 7DLH low borderline
PITA_000031001-RA Alkaloid 7DLH medium borderline
PITA_000033874-RA Alkaloid 7DLH low borderline
PITA_000034050-RA Alkaloid 7DLH medium borderline
PITA_000036362-RA Alkaloid 7DLH low borderline
PITA_000040629-RA Alkaloid 7DLH low borderline
PITA_000041044-RA Alkaloid 7DLH medium borderline
PITA_000043159-RA Alkaloid 7DLH low borderline
PITA_000043652-RA Alkaloid 7DLH low borderline
PITA_000047377-RA Alkaloid 7DLH low borderline
PITA_000050373-RA Alkaloid 7DLH low borderline
PITA_000050525-RA Alkaloid 7DLH medium borderline
PITA_000050737-RA Alkaloid 7DLH low borderline
PITA_000050796-RA Alkaloid 7DLH low borderline
PITA_000050797-RA Alkaloid 7DLH low borderline
PITA_000051239-RA Alkaloid 7DLH low borderline
PITA_000051534-RA Alkaloid 7DLH low borderline
PITA_000052928-RA Alkaloid 7DLH medium borderline
PITA_000053198-RA Alkaloid 7DLH low borderline
PITA_000054011-RA Alkaloid 7DLH low borderline
PITA_000055788-RA Alkaloid 7DLH low borderline
PITA_000057147-RA Alkaloid 7DLH low borderline
PITA_000058864-RA Alkaloid 7DLH low borderline
PITA_000061380-RA Alkaloid 7DLH low borderline
PITA_000061518-RA Alkaloid 7DLH low borderline
PITA_000062297-RA Alkaloid 7DLH low borderline
PITA_000062743-RA Alkaloid 7DLH medium borderline
PITA_000063635-RA Alkaloid 7DLH medium borderline
PITA_000065150-RA Alkaloid 7DLH medium borderline
PITA_000065196-RA Alkaloid 7DLH low borderline
PITA_000065264-RA Alkaloid 7DLH low borderline
PITA_000066592-RA Alkaloid 7DLH low borderline