Pinus taeda (pinus_taeda)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 27.92% Phenylpropanoid pathway 23.93% Alkaloid pathway 19.88% Flavonoid pathway 15.18% Rosmarinic acid pathway 7.75% Steroid pathway 5.34%

Family Distribution

12692 Family-Level Calls

C4H 5.65% C3'H/CYP98A 5.17% UGT 4.84% 4CL 4.56% CYP76 4.22% BAHD 4.21% POD 4.18% 7DLGT 3.84%

Other Families 63.32%

More Families (98)

UFGT 426 3.36% IFS 424 3.34% TPS 369 2.91% F3H 301 2.37% DWF4/CYP90B1 292 2.3% CAD 273 2.15% GES 258 2.03% F3'H/CYP75B 253 1.99% CAS 239 1.88% BR6OX2/CYP85A2 234 1.84% G8O/G8H 232 1.83% LAC 227 1.79% T3O 208 1.64% H6H 200 1.58% IFR 189 1.49% T16H 183 1.44% CODM/T6ODM 181 1.43% IO 156 1.23% NMT 151 1.19% F3'5'H/CYP75A 138 1.09% TRI/TRII 135 1.06% SGD 134 1.06% COMT 128 1.01% HCT 118 0.93% PAL 117 0.92% STR 98 0.77% SMT1/SMT2/SMT3 98 0.77% FNS 96 0.76% F5H/CYP84A 94 0.74% PYKS 92 0.72% 8HGO 89 0.7% 7DLH 89 0.7% RAS 85 0.67% GS 84 0.66% 16OMT 80 0.63% PMT 76 0.6% SLS 75 0.59% ANR 74 0.58% HMGR 74 0.58% ANS/LDOX 73 0.58% DFR 69 0.54% CYP90D1 69 0.54% CHS 67 0.53% CCR 64 0.5% LAMT 60 0.47% NCS 59 0.46% CSE 54 0.43% TAT 50 0.39% CPD/CYP90A1 47 0.37% GGPPS 43 0.34% BR6OX1/CYP85A1 41 0.32% CYP80B1 39 0.31% ISY 38 0.3% BBE 34 0.27% CYP71 31 0.24% XMT_MXMT_DXMT 28 0.22% ADC 26 0.2% ODC 24 0.19% CHI 24 0.19% FPPS 24 0.19% CYP719 23 0.18% COR 22 0.17% 6OMT_4OMT_SOMT 19 0.15% CCoAOMT 18 0.14% ROT3/CYP90C1 18 0.14% CNMT 17 0.13% MPO 15 0.12% FLS 15 0.12% DWF1 13 0.1% DET2 12 0.09% AACT 12 0.09% CYP51G1 10 0.08% CPR 9 0.07% HDS/IspG 9 0.07% IDI 9 0.07% MVK 8 0.06% HPPR 7 0.06% DWF5 7 0.06% CYP80F1 6 0.05% CMK/IspE 6 0.05% DXS 6 0.05% TDC 4 0.03% SQS/FDFT1 4 0.03% SQE 4 0.03% HYD1 3 0.02% CPI1 3 0.02% HDR/IspH 3 0.02% HMGS 3 0.02% MVD 3 0.02% FK 2 0.02% SMO1/SMO2 2 0.02% DWF7 2 0.02% DXR 2 0.02% PMK 2 0.02% MDS/IspF 2 0.02% TYDC_DDC 1 0.01% MCT/IspD 1 0.01% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	1469	18	UGT (484)	View species results
Phenylpropanoid pathway	1259	13	POD (460)	View species results
Alkaloid pathway	1046	30	7DLGT (246)	View species results
Flavonoid pathway	799	16	UFGT (341)	View species results
Rosmarinic acid pathway	408	7	4CL (161)	View species results
Steroid pathway	281	16	CAS (195)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	4571	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	737	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
PITA_000040245-RA	Terpenoid	BAHD	low	borderline	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
PITA_000040254-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000040279-RA	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
PITA_000040660-RA	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
PITA_000040922-RA	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
PITA_000040923-RA	Terpenoid	BAHD	medium	pass	BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
PITA_000040966-RA	Terpenoid	BAHD	medium	pass	BAHD__00011__sp_A1A442_DGAT2_RICCO
PITA_000041079-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000041563-RA	Terpenoid	BAHD	medium	pass	BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000041599-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000041637-RA	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000041717-RA	Terpenoid	BAHD	medium	pass	BAHD__00028__sp_O80467_SDT_ARATH
PITA_000041718-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000041719-RA	Terpenoid	BAHD	low	borderline	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000041735-RA	Terpenoid	BAHD	low	borderline	BAHD__00028__sp_O80467_SDT_ARATH
PITA_000041882-RA	Terpenoid	BAHD	medium	pass	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
PITA_000042154-RA	Terpenoid	BAHD	medium	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
PITA_000042294-RA	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000042497-RA	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000042797-RA	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
PITA_000043228-RA	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000043229-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000043408-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000043662-RA	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
PITA_000043973-RA	Terpenoid	BAHD	medium	pass	BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
PITA_000044045-RA	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000044062-RA	Terpenoid	BAHD	low	borderline	BAHD__00087__sp_Q9M3B1_WSD6_ARATH
PITA_000044091-RA	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000044163-RA	Terpenoid	BAHD	low	borderline	BAHD__00028__sp_O80467_SDT_ARATH
PITA_000044424-RA	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
PITA_000044857-RA	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
PITA_000044888-RA	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
PITA_000045012-RA	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
PITA_000045042-RA	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
PITA_000045103-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000045401-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000045598-RA	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000045603-RA	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
PITA_000046634-RA	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000046769-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000047128-RA	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
PITA_000047171-RA	Terpenoid	BAHD	medium	pass	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
PITA_000047313-RA	Terpenoid	BAHD	medium	pass	BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000047315-RA	Terpenoid	BAHD	low	borderline	BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
PITA_000047399-RA	Terpenoid	BAHD	low	borderline	BAHD__00030__sp_O80816_GLC_ARATH
PITA_000048844-RA	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
PITA_000048983-RA	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
PITA_000049217-RA	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
PITA_000049748-RA	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
PITA_000050389-RA	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH