PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
Reset
Gene Pathway Family Confidence Status
PITA_000007203-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007289-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007688-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007754-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007756-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007978-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000007980-RA Phenylpropanoid C3'H/CYP98A high pass
PITA_000008353-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000008620-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000008622-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000008681-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000008695-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000008973-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000009191-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000009196-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000010136-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000010257-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000010264-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000010363-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000010409-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000010799-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000010839-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000010840-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000011056-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000011084-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000011474-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000011482-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000011912-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000011915-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000012074-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000012112-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000012113-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000012639-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000014468-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000014937-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000015103-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000015506-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000015650-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000015914-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000015915-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000015916-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000016126-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000016127-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000017562-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000019010-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000019034-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000019042-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000019446-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000019693-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000020060-RA Phenylpropanoid C3'H/CYP98A low borderline