PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
PITA_000020244-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000020566-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000020567-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000020568-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000020637-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000021078-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000021538-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000021926-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000022034-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000022145-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000022231-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000022232-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000022455-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000022456-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000022846-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000023051-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000023229-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000023275-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000023424-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000023499-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000023806-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000023808-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000024089-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000024090-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000024091-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000024104-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000024813-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000024905-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000025076-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025222-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025223-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025224-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025276-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025413-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025415-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000025496-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000025722-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000025907-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000026028-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000026664-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000026745-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000026842-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000027035-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000027160-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000027632-RA Phenylpropanoid C3'H/CYP98A low borderline
PITA_000027819-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000028219-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000028221-RA Phenylpropanoid C3'H/CYP98A medium pass
PITA_000028224-RA Phenylpropanoid C3'H/CYP98A medium borderline
PITA_000028489-RA Phenylpropanoid C3'H/CYP98A medium borderline