PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
PITA_000022845-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000022926-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000023090-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000025753-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000026247-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000026353-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000027825-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000027826-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000028107-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000028108-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000028590-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000030337-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000032174-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000032660-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000033455-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000033786-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000033788-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000034700-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000034701-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000034702-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000034703-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000035063-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037122-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037125-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037126-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037544-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000037892-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000038511-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000040152-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000040153-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000041743-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000042894-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000043583-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000044974-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045097-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000045132-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045133-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045134-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045205-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045618-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045870-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000045871-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046233-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046285-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046556-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046557-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000046831-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000047230-RA Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
PITA_000048243-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000048496-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA