PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
PITA_000048776-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000049622-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000049912-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000050310-RA Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
PITA_000050354-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051547-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051560-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000051609-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052332-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052334-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000052495-RA Steroid CAS low borderline CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000053187-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053256-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053280-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053802-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000053861-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054679-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000054680-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000054694-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054962-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000054963-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000055269-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000057755-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000057896-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000059237-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000059417-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000059870-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000060070-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000060088-RA Steroid CAS low borderline CAS__00004__sp_O82139_CAS1_PANGI
PITA_000060338-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000060878-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000061394-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000061595-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000061686-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000061918-RA Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
PITA_000062422-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000062423-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000062484-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000063085-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000063608-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000063877-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000064222-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000064284-RA Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000064385-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000065035-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000065036-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000065460-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000066555-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000067102-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
PITA_000067795-RA Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA