PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
PITA_000029856-RA Alkaloid CODM/T6ODM medium borderline
PITA_000029881-RA Alkaloid CODM/T6ODM medium borderline
PITA_000029882-RA Alkaloid CODM/T6ODM medium borderline
PITA_000029883-RA Alkaloid CODM/T6ODM medium borderline
PITA_000030162-RA Alkaloid CODM/T6ODM medium borderline
PITA_000031436-RA Alkaloid CODM/T6ODM low borderline
PITA_000032956-RA Alkaloid CODM/T6ODM low borderline
PITA_000034420-RA Alkaloid CODM/T6ODM medium borderline
PITA_000035381-RA Alkaloid CODM/T6ODM medium borderline
PITA_000038003-RA Alkaloid CODM/T6ODM medium borderline
PITA_000038698-RA Alkaloid CODM/T6ODM medium borderline
PITA_000038700-RA Alkaloid CODM/T6ODM medium borderline
PITA_000039907-RA Alkaloid CODM/T6ODM medium borderline
PITA_000040227-RA Alkaloid CODM/T6ODM medium borderline
PITA_000040484-RA Alkaloid CODM/T6ODM low borderline
PITA_000040503-RA Alkaloid CODM/T6ODM low borderline
PITA_000042782-RA Alkaloid CODM/T6ODM medium borderline
PITA_000043339-RA Alkaloid CODM/T6ODM medium borderline
PITA_000043341-RA Alkaloid CODM/T6ODM medium borderline
PITA_000044247-RA Alkaloid CODM/T6ODM medium borderline
PITA_000046174-RA Alkaloid CODM/T6ODM medium borderline
PITA_000047344-RA Alkaloid CODM/T6ODM medium borderline
PITA_000049241-RA Alkaloid CODM/T6ODM medium borderline
PITA_000049326-RA Alkaloid CODM/T6ODM medium borderline
PITA_000049618-RA Alkaloid CODM/T6ODM medium borderline
PITA_000049750-RA Alkaloid CODM/T6ODM medium borderline
PITA_000050314-RA Alkaloid CODM/T6ODM medium borderline
PITA_000050478-RA Alkaloid CODM/T6ODM medium borderline
PITA_000051197-RA Alkaloid CODM/T6ODM medium borderline
PITA_000052403-RA Alkaloid CODM/T6ODM medium borderline
PITA_000052573-RA Alkaloid CODM/T6ODM medium borderline
PITA_000053188-RA Alkaloid CODM/T6ODM medium borderline
PITA_000053947-RA Alkaloid CODM/T6ODM medium borderline
PITA_000054789-RA Alkaloid CODM/T6ODM low borderline
PITA_000054793-RA Alkaloid CODM/T6ODM medium borderline
PITA_000054923-RA Alkaloid CODM/T6ODM medium borderline
PITA_000055030-RA Alkaloid CODM/T6ODM medium borderline
PITA_000055697-RA Alkaloid CODM/T6ODM medium borderline
PITA_000056313-RA Alkaloid CODM/T6ODM medium borderline
PITA_000056466-RA Alkaloid CODM/T6ODM medium borderline
PITA_000056958-RA Alkaloid CODM/T6ODM medium borderline
PITA_000057400-RA Alkaloid CODM/T6ODM medium borderline
PITA_000058451-RA Alkaloid CODM/T6ODM medium borderline
PITA_000058977-RA Alkaloid CODM/T6ODM medium borderline
PITA_000059220-RA Alkaloid CODM/T6ODM medium borderline
PITA_000060428-RA Alkaloid CODM/T6ODM medium borderline
PITA_000060615-RA Alkaloid CODM/T6ODM medium borderline
PITA_000061487-RA Alkaloid CODM/T6ODM medium borderline
PITA_000061830-RA Alkaloid CODM/T6ODM low borderline
PITA_000061987-RA Alkaloid CODM/T6ODM medium borderline