PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
PITA_000047234-RA Phenylpropanoid COMT low borderline
PITA_000047466-RA Phenylpropanoid COMT medium pass
PITA_000050784-RA Phenylpropanoid COMT low borderline
PITA_000050943-RA Phenylpropanoid COMT medium pass
PITA_000051996-RA Phenylpropanoid COMT medium pass
PITA_000052052-RA Phenylpropanoid COMT low borderline
PITA_000052262-RA Phenylpropanoid COMT low borderline
PITA_000052937-RA Phenylpropanoid COMT medium pass
PITA_000052939-RA Phenylpropanoid COMT low borderline
PITA_000052940-RA Phenylpropanoid COMT low borderline
PITA_000054877-RA Phenylpropanoid COMT low borderline
PITA_000054916-RA Phenylpropanoid COMT medium pass
PITA_000055072-RA Phenylpropanoid COMT medium pass
PITA_000055074-RA Phenylpropanoid COMT medium pass
PITA_000055356-RA Phenylpropanoid COMT medium pass
PITA_000055758-RA Phenylpropanoid COMT medium pass
PITA_000055974-RA Phenylpropanoid COMT medium pass
PITA_000056007-RA Phenylpropanoid COMT low borderline
PITA_000058465-RA Phenylpropanoid COMT medium pass
PITA_000059840-RA Phenylpropanoid COMT medium pass
PITA_000060469-RA Phenylpropanoid COMT medium pass
PITA_000061005-RA Phenylpropanoid COMT medium pass
PITA_000064040-RA Phenylpropanoid COMT medium pass
PITA_000065707-RA Phenylpropanoid COMT medium pass
PITA_000067887-RA Phenylpropanoid COMT medium pass
PITA_000069412-RA Phenylpropanoid COMT low borderline
PITA_000070683-RA Phenylpropanoid COMT medium pass
PITA_000071447-RA Phenylpropanoid COMT medium pass
PITA_000071685-RA Phenylpropanoid COMT medium pass
PITA_000071851-RA Phenylpropanoid COMT medium pass
PITA_000072030-RA Phenylpropanoid COMT medium pass
PITA_000073071-RA Phenylpropanoid COMT medium pass
PITA_000073319-RA Phenylpropanoid COMT medium pass
PITA_000073320-RA Phenylpropanoid COMT medium pass
PITA_000075665-RA Phenylpropanoid COMT medium pass
PITA_000076633-RA Phenylpropanoid COMT medium pass
PITA_000077398-RA Phenylpropanoid COMT medium pass
PITA_000077990-RA Phenylpropanoid COMT low borderline
PITA_000077991-RA Phenylpropanoid COMT medium pass
PITA_000080349-RA Phenylpropanoid COMT medium pass
PITA_000080753-RA Phenylpropanoid COMT medium pass
PITA_000081249-RA Phenylpropanoid COMT medium pass
PITA_000081289-RA Phenylpropanoid COMT medium pass
PITA_000082453-RA Phenylpropanoid COMT medium pass
PITA_000082709-RA Phenylpropanoid COMT medium pass
PITA_000083240-RA Phenylpropanoid COMT medium pass
PITA_000083650-RA Phenylpropanoid COMT medium pass
PITA_000083651-RA Phenylpropanoid COMT low borderline
PITA_000084483-RA Phenylpropanoid COMT medium pass
PITA_000084573-RA Phenylpropanoid COMT medium pass