PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
PITA_000008622-RA Terpenoid CYP76 medium borderline
PITA_000008681-RA Terpenoid CYP76 medium borderline
PITA_000008695-RA Terpenoid CYP76 medium pass
PITA_000009191-RA Terpenoid CYP76 medium pass
PITA_000009196-RA Terpenoid CYP76 medium pass
PITA_000010136-RA Terpenoid CYP76 medium borderline
PITA_000010256-RA Terpenoid CYP76 medium pass
PITA_000010264-RA Terpenoid CYP76 medium borderline
PITA_000010363-RA Terpenoid CYP76 medium borderline
PITA_000010409-RA Terpenoid CYP76 medium borderline
PITA_000010839-RA Terpenoid CYP76 medium borderline
PITA_000010840-RA Terpenoid CYP76 medium borderline
PITA_000011056-RA Terpenoid CYP76 low borderline
PITA_000011482-RA Terpenoid CYP76 medium borderline
PITA_000012112-RA Terpenoid CYP76 medium borderline
PITA_000012113-RA Terpenoid CYP76 medium pass
PITA_000012639-RA Terpenoid CYP76 medium borderline
PITA_000013490-RA Terpenoid CYP76 medium pass
PITA_000013707-RA Terpenoid CYP76 low borderline
PITA_000014937-RA Terpenoid CYP76 medium pass
PITA_000014939-RA Terpenoid CYP76 low borderline
PITA_000015505-RA Terpenoid CYP76 low borderline
PITA_000015506-RA Terpenoid CYP76 medium pass
PITA_000015650-RA Terpenoid CYP76 medium pass
PITA_000016126-RA Terpenoid CYP76 medium pass
PITA_000016127-RA Terpenoid CYP76 medium pass
PITA_000016134-RA Terpenoid CYP76 low borderline
PITA_000016203-RA Terpenoid CYP76 low borderline
PITA_000018199-RA Terpenoid CYP76 low borderline
PITA_000019010-RA Terpenoid CYP76 low borderline
PITA_000019040-RA Terpenoid CYP76 medium pass
PITA_000019042-RA Terpenoid CYP76 low borderline
PITA_000019446-RA Terpenoid CYP76 medium pass
PITA_000019693-RA Terpenoid CYP76 medium borderline
PITA_000020244-RA Terpenoid CYP76 low borderline
PITA_000021158-RA Terpenoid CYP76 low borderline
PITA_000022034-RA Terpenoid CYP76 medium pass
PITA_000022231-RA Terpenoid CYP76 medium borderline
PITA_000022232-RA Terpenoid CYP76 medium borderline
PITA_000022455-RA Terpenoid CYP76 medium borderline
PITA_000022456-RA Terpenoid CYP76 medium borderline
PITA_000023051-RA Terpenoid CYP76 low borderline
PITA_000023275-RA Terpenoid CYP76 medium pass
PITA_000023499-RA Terpenoid CYP76 medium borderline
PITA_000023806-RA Terpenoid CYP76 medium borderline
PITA_000023807-RA Terpenoid CYP76 low borderline
PITA_000023808-RA Terpenoid CYP76 medium borderline
PITA_000024089-RA Terpenoid CYP76 medium pass
PITA_000024090-RA Terpenoid CYP76 medium borderline
PITA_000024091-RA Terpenoid CYP76 medium borderline