PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
PITA_000024104-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000024813-RA Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
PITA_000024905-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000025276-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000025412-RA Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
PITA_000025415-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000025722-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000025817-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000025821-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000025906-RA Terpenoid CYP76 medium pass CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
PITA_000025907-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000027035-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000027160-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000027632-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000027819-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000028219-RA Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
PITA_000028221-RA Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
PITA_000028224-RA Terpenoid CYP76 medium pass CYP76__00014__sp_I3PFJ5_C76AD_BETVU
PITA_000028489-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000028490-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000028491-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000028722-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000028834-RA Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000029494-RA Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
PITA_000029496-RA Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
PITA_000029497-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000029574-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000029731-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000029785-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000029796-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000030452-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000030453-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000030719-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000030991-RA Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
PITA_000030992-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000031376-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000031518-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000031833-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032079-RA Terpenoid CYP76 low borderline CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
PITA_000032119-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000032176-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032619-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032652-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032929-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032932-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000032933-RA Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000033312-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000033586-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000033627-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000033717-RA Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO