PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000034158-RA Terpenoid CYP76 medium pass
PITA_000034174-RA Terpenoid CYP76 low borderline
PITA_000034815-RA Terpenoid CYP76 medium borderline
PITA_000035695-RA Terpenoid CYP76 medium borderline
PITA_000035716-RA Terpenoid CYP76 low borderline
PITA_000035717-RA Terpenoid CYP76 low borderline
PITA_000036291-RA Terpenoid CYP76 medium borderline
PITA_000036390-RA Terpenoid CYP76 low borderline
PITA_000037316-RA Terpenoid CYP76 medium pass
PITA_000037777-RA Terpenoid CYP76 low borderline
PITA_000038416-RA Terpenoid CYP76 medium pass
PITA_000038519-RA Terpenoid CYP76 medium borderline
PITA_000038593-RA Terpenoid CYP76 medium pass
PITA_000038705-RA Terpenoid CYP76 low borderline
PITA_000038706-RA Terpenoid CYP76 medium borderline
PITA_000038819-RA Terpenoid CYP76 medium pass
PITA_000038920-RA Terpenoid CYP76 medium pass
PITA_000039216-RA Terpenoid CYP76 medium pass
PITA_000039712-RA Terpenoid CYP76 medium borderline
PITA_000040187-RA Terpenoid CYP76 medium borderline
PITA_000041890-RA Terpenoid CYP76 medium borderline
PITA_000041936-RA Terpenoid CYP76 medium pass
PITA_000042162-RA Terpenoid CYP76 medium pass
PITA_000042245-RA Terpenoid CYP76 low borderline
PITA_000042435-RA Terpenoid CYP76 low borderline
PITA_000044227-RA Terpenoid CYP76 medium pass
PITA_000044249-RA Terpenoid CYP76 medium pass
PITA_000044925-RA Terpenoid CYP76 medium pass
PITA_000044926-RA Terpenoid CYP76 medium pass
PITA_000045152-RA Terpenoid CYP76 medium borderline
PITA_000045298-RA Terpenoid CYP76 medium pass
PITA_000045701-RA Terpenoid CYP76 low borderline
PITA_000046083-RA Terpenoid CYP76 medium borderline
PITA_000046305-RA Terpenoid CYP76 medium pass
PITA_000046345-RA Terpenoid CYP76 medium pass
PITA_000046584-RA Terpenoid CYP76 medium pass
PITA_000046792-RA Terpenoid CYP76 medium pass
PITA_000047036-RA Terpenoid CYP76 medium borderline
PITA_000047521-RA Terpenoid CYP76 medium borderline
PITA_000047962-RA Terpenoid CYP76 low borderline
PITA_000048213-RA Terpenoid CYP76 medium pass
PITA_000048309-RA Terpenoid CYP76 low borderline
PITA_000048611-RA Terpenoid CYP76 low borderline
PITA_000048612-RA Terpenoid CYP76 medium pass
PITA_000048760-RA Terpenoid CYP76 medium pass
PITA_000049421-RA Terpenoid CYP76 medium pass
PITA_000049425-RA Terpenoid CYP76 medium pass
PITA_000050040-RA Terpenoid CYP76 medium pass
PITA_000050286-RA Terpenoid CYP76 medium borderline
PITA_000050799-RA Terpenoid CYP76 medium pass