PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000074204-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000074612-RA Terpenoid CYP76 medium borderline CYP76__00005__sp_A0A125QZE2_C76K1_SALMI
PITA_000074613-RA Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000074614-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000074708-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000074800-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000074926-RA Terpenoid CYP76 medium borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000075134-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000075141-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000075297-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000075298-RA Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
PITA_000075416-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000075461-RA Terpenoid CYP76 low borderline CYP76__00015__sp_P0DKI2_C76AN_BETVU
PITA_000075472-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000075473-RA Terpenoid CYP76 low borderline CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF
PITA_000075585-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000075604-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000075839-RA Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000076041-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000076042-RA Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000076096-RA Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
PITA_000076273-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000076418-RA Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000076452-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000076682-RA Terpenoid CYP76 medium borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
PITA_000076706-RA Terpenoid CYP76 medium borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
PITA_000076829-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000077296-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000077664-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000077814-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000078078-RA Terpenoid CYP76 low borderline CYP76__00020__sp_Q6YTF5_C76M5_ORYSJ
PITA_000078315-RA Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000078503-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000078537-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000078538-RA Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000078589-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
PITA_000078716-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
PITA_000078752-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
PITA_000078969-RA Terpenoid CYP76 low borderline CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF
PITA_000079205-RA Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
PITA_000079206-RA Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
PITA_000079342-RA Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
PITA_000079570-RA Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
PITA_000079578-RA Terpenoid CYP76 low borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
PITA_000079579-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
PITA_000079715-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
PITA_000079988-RA Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
PITA_000080006-RA Terpenoid CYP76 medium pass CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
PITA_000080007-RA Terpenoid CYP76 medium pass CYP76__00024__sp_W0FKI0_DOX1_PERHD
PITA_000080128-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO