PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000025224-RA Steroid DWF4/CYP90B1 low borderline
PITA_000025795-RA Steroid DWF4/CYP90B1 low borderline
PITA_000025817-RA Steroid DWF4/CYP90B1 low borderline
PITA_000025907-RA Steroid DWF4/CYP90B1 low borderline
PITA_000026028-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000026664-RA Steroid DWF4/CYP90B1 low borderline
PITA_000026798-RA Steroid DWF4/CYP90B1 low borderline
PITA_000027035-RA Steroid DWF4/CYP90B1 low borderline
PITA_000027160-RA Steroid DWF4/CYP90B1 low borderline
PITA_000027540-RA Steroid DWF4/CYP90B1 low borderline
PITA_000027819-RA Steroid DWF4/CYP90B1 low borderline
PITA_000028489-RA Steroid DWF4/CYP90B1 low borderline
PITA_000028491-RA Steroid DWF4/CYP90B1 low borderline
PITA_000029496-RA Steroid DWF4/CYP90B1 low borderline
PITA_000029796-RA Steroid DWF4/CYP90B1 low borderline
PITA_000030992-RA Steroid DWF4/CYP90B1 low borderline
PITA_000031376-RA Steroid DWF4/CYP90B1 low borderline
PITA_000031518-RA Steroid DWF4/CYP90B1 low borderline
PITA_000031833-RA Steroid DWF4/CYP90B1 low borderline
PITA_000032240-RA Steroid DWF4/CYP90B1 low borderline
PITA_000032619-RA Steroid DWF4/CYP90B1 low borderline
PITA_000032651-RA Steroid DWF4/CYP90B1 low borderline
PITA_000032770-RA Steroid DWF4/CYP90B1 low borderline
PITA_000033090-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000033627-RA Steroid DWF4/CYP90B1 low borderline
PITA_000033873-RA Steroid DWF4/CYP90B1 low borderline
PITA_000033874-RA Steroid DWF4/CYP90B1 low borderline
PITA_000034050-RA Steroid DWF4/CYP90B1 low borderline
PITA_000035695-RA Steroid DWF4/CYP90B1 low borderline
PITA_000036203-RA Steroid DWF4/CYP90B1 low borderline
PITA_000036465-RA Steroid DWF4/CYP90B1 low borderline
PITA_000036656-RA Steroid DWF4/CYP90B1 low borderline
PITA_000037593-RA Steroid DWF4/CYP90B1 low borderline
PITA_000037899-RA Steroid DWF4/CYP90B1 low borderline
PITA_000038318-RA Steroid DWF4/CYP90B1 low borderline
PITA_000038416-RA Steroid DWF4/CYP90B1 low borderline
PITA_000038519-RA Steroid DWF4/CYP90B1 low borderline
PITA_000038956-RA Steroid DWF4/CYP90B1 low borderline
PITA_000039216-RA Steroid DWF4/CYP90B1 low borderline
PITA_000039315-RA Steroid DWF4/CYP90B1 low borderline
PITA_000039665-RA Steroid DWF4/CYP90B1 low borderline
PITA_000040187-RA Steroid DWF4/CYP90B1 low borderline
PITA_000040629-RA Steroid DWF4/CYP90B1 low borderline
PITA_000040800-RA Steroid DWF4/CYP90B1 low borderline
PITA_000040801-RA Steroid DWF4/CYP90B1 low borderline
PITA_000041044-RA Steroid DWF4/CYP90B1 low borderline
PITA_000041624-RA Steroid DWF4/CYP90B1 low borderline
PITA_000041890-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000042162-RA Steroid DWF4/CYP90B1 low borderline
PITA_000042245-RA Steroid DWF4/CYP90B1 low borderline