PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000042435-RA Steroid DWF4/CYP90B1 low borderline
PITA_000043158-RA Steroid DWF4/CYP90B1 low borderline
PITA_000044227-RA Steroid DWF4/CYP90B1 low borderline
PITA_000044925-RA Steroid DWF4/CYP90B1 low borderline
PITA_000045152-RA Steroid DWF4/CYP90B1 low borderline
PITA_000045435-RA Steroid DWF4/CYP90B1 low borderline
PITA_000045577-RA Steroid DWF4/CYP90B1 medium pass
PITA_000045580-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000046305-RA Steroid DWF4/CYP90B1 low borderline
PITA_000046984-RA Steroid DWF4/CYP90B1 low borderline
PITA_000047329-RA Steroid DWF4/CYP90B1 low borderline
PITA_000047689-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000047690-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000048213-RA Steroid DWF4/CYP90B1 low borderline
PITA_000048290-RA Steroid DWF4/CYP90B1 medium pass
PITA_000048445-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000048497-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000048506-RA Steroid DWF4/CYP90B1 low borderline
PITA_000050737-RA Steroid DWF4/CYP90B1 low borderline
PITA_000050796-RA Steroid DWF4/CYP90B1 low borderline
PITA_000050800-RA Steroid DWF4/CYP90B1 low borderline
PITA_000051216-RA Steroid DWF4/CYP90B1 low borderline
PITA_000051298-RA Steroid DWF4/CYP90B1 low borderline
PITA_000051443-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000051597-RA Steroid DWF4/CYP90B1 low borderline
PITA_000051658-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000051869-RA Steroid DWF4/CYP90B1 low borderline
PITA_000052867-RA Steroid DWF4/CYP90B1 low borderline
PITA_000052955-RA Steroid DWF4/CYP90B1 low borderline
PITA_000053114-RA Steroid DWF4/CYP90B1 low borderline
PITA_000053385-RA Steroid DWF4/CYP90B1 low borderline
PITA_000053894-RA Steroid DWF4/CYP90B1 low borderline
PITA_000054034-RA Steroid DWF4/CYP90B1 low borderline
PITA_000054037-RA Steroid DWF4/CYP90B1 low borderline
PITA_000054286-RA Steroid DWF4/CYP90B1 low borderline
PITA_000054547-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000055337-RA Steroid DWF4/CYP90B1 low borderline
PITA_000055498-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000057135-RA Steroid DWF4/CYP90B1 low borderline
PITA_000057497-RA Steroid DWF4/CYP90B1 low borderline
PITA_000057798-RA Steroid DWF4/CYP90B1 low borderline
PITA_000058072-RA Steroid DWF4/CYP90B1 low borderline
PITA_000058201-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000058398-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000058857-RA Steroid DWF4/CYP90B1 low borderline
PITA_000058968-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000059825-RA Steroid DWF4/CYP90B1 low borderline
PITA_000059899-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000060831-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000060836-RA Steroid DWF4/CYP90B1 low borderline