PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000060842-RA Steroid DWF4/CYP90B1 low borderline
PITA_000060857-RA Steroid DWF4/CYP90B1 low borderline
PITA_000061339-RA Steroid DWF4/CYP90B1 low borderline
PITA_000061779-RA Steroid DWF4/CYP90B1 low borderline
PITA_000061894-RA Steroid DWF4/CYP90B1 low borderline
PITA_000061979-RA Steroid DWF4/CYP90B1 low borderline
PITA_000062581-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000062884-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063225-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063320-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000063500-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063628-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000063635-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000063702-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063726-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063794-RA Steroid DWF4/CYP90B1 low borderline
PITA_000063856-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064037-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064038-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064056-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064287-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064615-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064652-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000064655-RA Steroid DWF4/CYP90B1 low borderline
PITA_000064853-RA Steroid DWF4/CYP90B1 low borderline
PITA_000065150-RA Steroid DWF4/CYP90B1 low borderline
PITA_000065194-RA Steroid DWF4/CYP90B1 low borderline
PITA_000065244-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000065515-RA Steroid DWF4/CYP90B1 low borderline
PITA_000065529-RA Steroid DWF4/CYP90B1 low borderline
PITA_000065711-RA Steroid DWF4/CYP90B1 low borderline
PITA_000066018-RA Steroid DWF4/CYP90B1 low borderline
PITA_000066400-RA Steroid DWF4/CYP90B1 low borderline
PITA_000067444-RA Steroid DWF4/CYP90B1 low borderline
PITA_000067882-RA Steroid DWF4/CYP90B1 low borderline
PITA_000067982-RA Steroid DWF4/CYP90B1 low borderline
PITA_000068394-RA Steroid DWF4/CYP90B1 low borderline
PITA_000068819-RA Steroid DWF4/CYP90B1 low borderline
PITA_000069200-RA Steroid DWF4/CYP90B1 low borderline
PITA_000069443-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000069677-RA Steroid DWF4/CYP90B1 low borderline
PITA_000070258-RA Steroid DWF4/CYP90B1 low borderline
PITA_000071437-RA Steroid DWF4/CYP90B1 low borderline
PITA_000071576-RA Steroid DWF4/CYP90B1 low borderline
PITA_000071639-RA Steroid DWF4/CYP90B1 low borderline
PITA_000071810-RA Steroid DWF4/CYP90B1 low borderline
PITA_000071999-RA Steroid DWF4/CYP90B1 low borderline
PITA_000072016-RA Steroid DWF4/CYP90B1 low borderline
PITA_000072646-RA Steroid DWF4/CYP90B1 low borderline
PITA_000072652-RA Steroid DWF4/CYP90B1 low borderline