PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000072900-RA Steroid DWF4/CYP90B1 low borderline
PITA_000073006-RA Steroid DWF4/CYP90B1 low borderline
PITA_000073022-RA Steroid DWF4/CYP90B1 low borderline
PITA_000073573-RA Steroid DWF4/CYP90B1 low borderline
PITA_000073637-RA Steroid DWF4/CYP90B1 low borderline
PITA_000073988-RA Steroid DWF4/CYP90B1 low borderline
PITA_000074204-RA Steroid DWF4/CYP90B1 low borderline
PITA_000074527-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000074800-RA Steroid DWF4/CYP90B1 low borderline
PITA_000075416-RA Steroid DWF4/CYP90B1 low borderline
PITA_000075472-RA Steroid DWF4/CYP90B1 low borderline
PITA_000075585-RA Steroid DWF4/CYP90B1 low borderline
PITA_000075792-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000076004-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000076273-RA Steroid DWF4/CYP90B1 low borderline
PITA_000077229-RA Steroid DWF4/CYP90B1 low borderline
PITA_000077279-RA Steroid DWF4/CYP90B1 low borderline
PITA_000077296-RA Steroid DWF4/CYP90B1 low borderline
PITA_000077318-RA Steroid DWF4/CYP90B1 low borderline
PITA_000077638-RA Steroid DWF4/CYP90B1 low borderline
PITA_000078503-RA Steroid DWF4/CYP90B1 low borderline
PITA_000078870-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000079350-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000079570-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000079579-RA Steroid DWF4/CYP90B1 low borderline
PITA_000079715-RA Steroid DWF4/CYP90B1 low borderline
PITA_000081015-RA Steroid DWF4/CYP90B1 low borderline
PITA_000081366-RA Steroid DWF4/CYP90B1 low borderline
PITA_000081737-RA Steroid DWF4/CYP90B1 low borderline
PITA_000081896-RA Steroid DWF4/CYP90B1 low borderline
PITA_000081970-RA Steroid DWF4/CYP90B1 low borderline
PITA_000082167-RA Steroid DWF4/CYP90B1 low borderline
PITA_000082505-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000082618-RA Steroid DWF4/CYP90B1 medium borderline
PITA_000082779-RA Steroid DWF4/CYP90B1 low borderline
PITA_000082851-RA Steroid DWF4/CYP90B1 low borderline
PITA_000082899-RA Steroid DWF4/CYP90B1 low borderline
PITA_000084007-RA Steroid DWF4/CYP90B1 low borderline
PITA_000084551-RA Steroid DWF4/CYP90B1 low borderline
PITA_000085267-RA Steroid DWF4/CYP90B1 low borderline
PITA_000085354-RA Steroid DWF4/CYP90B1 low borderline
PITA_000085580-RA Steroid DWF4/CYP90B1 low borderline
PITA_000086040-RA Steroid DWF4/CYP90B1 low borderline
PITA_000086372-RA Steroid DWF4/CYP90B1 low borderline
PITA_000087122-RA Steroid DWF4/CYP90B1 low borderline
PITA_000087228-RA Steroid DWF4/CYP90B1 low borderline
PITA_000087765-RA Steroid DWF4/CYP90B1 low borderline
PITA_000087768-RA Steroid DWF4/CYP90B1 low borderline
PITA_000088299-RA Steroid DWF4/CYP90B1 low borderline
PITA_000089025-RA Steroid DWF4/CYP90B1 medium borderline