PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'5'H/CYP75A
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Gene Pathway Family Confidence Status
PITA_000078717-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000078969-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000079485-RA Flavonoid F3'5'H/CYP75A medium pass
PITA_000079579-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000080007-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000080255-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000082899-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000083697-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000084485-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000084577-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000086849-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000088609-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000089316-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000089561-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000089674-RA Flavonoid F3'5'H/CYP75A medium pass
PITA_000090537-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000091032-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000091837-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000092870-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000092882-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000093010-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000093359-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000093441-RA Flavonoid F3'5'H/CYP75A low borderline
PITA_000093954-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094027-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094184-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094185-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094202-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094203-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000094249-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000095170-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000095405-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000095552-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000095736-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000095953-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000096156-RA Flavonoid F3'5'H/CYP75A medium borderline
PITA_000096549-RA Flavonoid F3'5'H/CYP75A medium borderline
PITAhm_000291-RA Flavonoid F3'5'H/CYP75A medium borderline