PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
PITA_000069358-RA Flavonoid F3H medium borderline
PITA_000069907-RA Flavonoid F3H medium borderline
PITA_000071959-RA Flavonoid F3H medium pass
PITA_000072248-RA Flavonoid F3H medium borderline
PITA_000072371-RA Flavonoid F3H medium borderline
PITA_000072558-RA Flavonoid F3H low borderline
PITA_000072931-RA Flavonoid F3H medium borderline
PITA_000073206-RA Flavonoid F3H medium borderline
PITA_000073613-RA Flavonoid F3H medium borderline
PITA_000073857-RA Flavonoid F3H low borderline
PITA_000074339-RA Flavonoid F3H low borderline
PITA_000074681-RA Flavonoid F3H medium borderline
PITA_000074881-RA Flavonoid F3H low borderline
PITA_000075017-RA Flavonoid F3H medium borderline
PITA_000075068-RA Flavonoid F3H medium borderline
PITA_000075124-RA Flavonoid F3H medium borderline
PITA_000075245-RA Flavonoid F3H medium pass
PITA_000075488-RA Flavonoid F3H medium borderline
PITA_000075642-RA Flavonoid F3H medium borderline
PITA_000076119-RA Flavonoid F3H medium borderline
PITA_000076298-RA Flavonoid F3H medium borderline
PITA_000076299-RA Flavonoid F3H low borderline
PITA_000076581-RA Flavonoid F3H medium borderline
PITA_000076919-RA Flavonoid F3H medium borderline
PITA_000077055-RA Flavonoid F3H medium borderline
PITA_000077826-RA Flavonoid F3H medium borderline
PITA_000078141-RA Flavonoid F3H medium borderline
PITA_000078375-RA Flavonoid F3H low borderline
PITA_000078556-RA Flavonoid F3H medium borderline
PITA_000078734-RA Flavonoid F3H low borderline
PITA_000078825-RA Flavonoid F3H medium borderline
PITA_000079168-RA Flavonoid F3H medium borderline
PITA_000079384-RA Flavonoid F3H medium borderline
PITA_000079491-RA Flavonoid F3H medium borderline
PITA_000079952-RA Flavonoid F3H medium borderline
PITA_000080267-RA Flavonoid F3H low borderline
PITA_000081077-RA Flavonoid F3H medium borderline
PITA_000081382-RA Flavonoid F3H medium borderline
PITA_000081703-RA Flavonoid F3H medium borderline
PITA_000082761-RA Flavonoid F3H medium borderline
PITA_000082903-RA Flavonoid F3H medium borderline
PITA_000083020-RA Flavonoid F3H medium pass
PITA_000083382-RA Flavonoid F3H medium pass
PITA_000083430-RA Flavonoid F3H medium borderline
PITA_000084129-RA Flavonoid F3H medium borderline
PITA_000084358-RA Flavonoid F3H medium borderline
PITA_000084515-RA Flavonoid F3H medium borderline
PITA_000084688-RA Flavonoid F3H medium borderline
PITA_000085003-RA Flavonoid F3H medium pass
PITA_000085663-RA Flavonoid F3H medium borderline