PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Protein/Isoform Record Pathway Family Confidence Status
2A_I13_NT_comp39368_c0_seq8|m.19043.mrna1 Flavonoid F3'H/CYP75B medium borderline
2A_I15_VO_L_3412_T_2/3|m.22314.mrna1 Flavonoid F3'H/CYP75B medium borderline
5A_all_VO_L_2_T_296355/409051|m.39907.mrna1 Flavonoid F3'H/CYP75B medium borderline
PITA_000000241-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000000727-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000000734-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000000975-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000001011-RA Flavonoid F3'H/CYP75B low borderline
PITA_000002319-RA Flavonoid F3'H/CYP75B low borderline
PITA_000002408-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000002872-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000005612-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000006102-RA Flavonoid F3'H/CYP75B low borderline
PITA_000007063-RA Flavonoid F3'H/CYP75B medium pass
PITA_000007204-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000007289-RA Flavonoid F3'H/CYP75B low borderline
PITA_000007754-RA Flavonoid F3'H/CYP75B low borderline
PITA_000007971-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000007978-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000008353-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000008622-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000008697-RA Flavonoid F3'H/CYP75B low borderline
PITA_000009196-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000010257-RA Flavonoid F3'H/CYP75B low borderline
PITA_000010363-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000012112-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000012113-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000015505-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000015506-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000016134-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000019010-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000019034-RA Flavonoid F3'H/CYP75B low borderline
PITA_000019042-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000019693-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000020244-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000020568-RA Flavonoid F3'H/CYP75B low borderline
PITA_000022145-RA Flavonoid F3'H/CYP75B low borderline
PITA_000022232-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000023229-RA Flavonoid F3'H/CYP75B low borderline
PITA_000023806-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000024104-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000024905-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000025222-RA Flavonoid F3'H/CYP75B low borderline
PITA_000025276-RA Flavonoid F3'H/CYP75B low borderline
PITA_000025412-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000025817-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000025906-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000027168-RA Flavonoid F3'H/CYP75B low borderline
PITA_000028219-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000028221-RA Flavonoid F3'H/CYP75B medium borderline