PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
PITA_000028491-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000028722-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000028834-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000029574-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000029594-RA Flavonoid F3'H/CYP75B low borderline
PITA_000029980-RA Flavonoid F3'H/CYP75B low borderline
PITA_000030103-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000030629-RA Flavonoid F3'H/CYP75B low borderline
PITA_000030718-RA Flavonoid F3'H/CYP75B low borderline
PITA_000030991-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000032119-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000032619-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000032932-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000033587-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000033873-RA Flavonoid F3'H/CYP75B low borderline
PITA_000034050-RA Flavonoid F3'H/CYP75B low borderline
PITA_000034158-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000034704-RA Flavonoid F3'H/CYP75B low borderline
PITA_000035695-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000035716-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000037316-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000038592-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000038593-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000038920-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000039132-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000039216-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000039605-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000039712-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000039713-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000040187-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000041624-RA Flavonoid F3'H/CYP75B low borderline
PITA_000041936-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000042162-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000042245-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000042435-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000043891-RA Flavonoid F3'H/CYP75B low borderline
PITA_000044925-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000045701-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000046082-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000046345-RA Flavonoid F3'H/CYP75B low borderline
PITA_000046584-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000046792-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000046984-RA Flavonoid F3'H/CYP75B low borderline
PITA_000047036-RA Flavonoid F3'H/CYP75B medium pass
PITA_000047087-RA Flavonoid F3'H/CYP75B low borderline
PITA_000047962-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000048213-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000048611-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000048612-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000050040-RA Flavonoid F3'H/CYP75B medium borderline