PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Gene Pathway Family Confidence Status
PITA_000050286-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000050480-RA Flavonoid F3'H/CYP75B low borderline
PITA_000050525-RA Flavonoid F3'H/CYP75B low borderline
PITA_000051216-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000051299-RA Flavonoid F3'H/CYP75B low borderline
PITA_000051406-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000051437-RA Flavonoid F3'H/CYP75B low borderline
PITA_000052929-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000052955-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000054034-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000054037-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000054286-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000054618-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000054771-RA Flavonoid F3'H/CYP75B low borderline
PITA_000057179-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000057182-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000057353-RA Flavonoid F3'H/CYP75B low borderline
PITA_000057423-RA Flavonoid F3'H/CYP75B low borderline
PITA_000057497-RA Flavonoid F3'H/CYP75B low borderline
PITA_000057798-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000058988-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000058990-RA Flavonoid F3'H/CYP75B medium pass
PITA_000059798-RA Flavonoid F3'H/CYP75B low borderline
PITA_000060286-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000061415-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000061416-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000061729-RA Flavonoid F3'H/CYP75B low borderline
PITA_000061815-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000061894-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000061895-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000062146-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000062408-RA Flavonoid F3'H/CYP75B high pass
PITA_000062453-RA Flavonoid F3'H/CYP75B low borderline
PITA_000062529-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000062743-RA Flavonoid F3'H/CYP75B low borderline
PITA_000063232-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000063856-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000064714-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000064853-RA Flavonoid F3'H/CYP75B low borderline
PITA_000065149-RA Flavonoid F3'H/CYP75B low borderline
PITA_000065150-RA Flavonoid F3'H/CYP75B low borderline
PITA_000065815-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000066648-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000067892-RA Flavonoid F3'H/CYP75B low borderline
PITA_000069067-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000069088-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000069089-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000069201-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000069478-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000070945-RA Flavonoid F3'H/CYP75B medium borderline