PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000071437-RA Flavonoid F3'H/CYP75B low borderline
PITA_000071576-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000071940-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000071999-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072016-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072227-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072272-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072357-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072463-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072646-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000072900-RA Flavonoid F3'H/CYP75B low borderline
PITA_000072957-RA Flavonoid F3'H/CYP75B low borderline
PITA_000073188-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000074384-RA Flavonoid F3'H/CYP75B low borderline
PITA_000074612-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000074643-RA Flavonoid F3'H/CYP75B low borderline
PITA_000074708-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000074926-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000075134-RA Flavonoid F3'H/CYP75B low borderline
PITA_000075298-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000075461-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000075604-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000076096-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000076411-RA Flavonoid F3'H/CYP75B low borderline
PITA_000076511-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000076706-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000077229-RA Flavonoid F3'H/CYP75B low borderline
PITA_000077814-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000078315-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000078503-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000078537-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000078716-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000079205-RA Flavonoid F3'H/CYP75B low borderline
PITA_000079312-RA Flavonoid F3'H/CYP75B low borderline
PITA_000079578-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000079715-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000079988-RA Flavonoid F3'H/CYP75B medium pass
PITA_000080176-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081073-RA Flavonoid F3'H/CYP75B low borderline
PITA_000081243-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081358-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081366-RA Flavonoid F3'H/CYP75B low borderline
PITA_000081593-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081721-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081785-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000081786-RA Flavonoid F3'H/CYP75B low borderline
PITA_000081896-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000082967-RA Flavonoid F3'H/CYP75B low borderline
PITA_000083176-RA Flavonoid F3'H/CYP75B medium borderline
PITA_000083269-RA Flavonoid F3'H/CYP75B medium borderline