PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
PITA_000057153-RA Flavonoid FNS medium borderline
PITA_000058409-RA Flavonoid FNS medium borderline
PITA_000058989-RA Flavonoid FNS medium borderline
PITA_000059948-RA Flavonoid FNS medium borderline
PITA_000059993-RA Flavonoid FNS medium borderline
PITA_000063305-RA Flavonoid FNS low borderline
PITA_000064139-RA Flavonoid FNS low borderline
PITA_000065264-RA Flavonoid FNS low borderline
PITA_000066505-RA Flavonoid FNS low borderline
PITA_000067475-RA Flavonoid FNS medium borderline
PITA_000068973-RA Flavonoid FNS medium borderline
PITA_000069199-RA Flavonoid FNS medium borderline
PITA_000069888-RA Flavonoid FNS medium borderline
PITA_000070368-RA Flavonoid FNS medium borderline
PITA_000071639-RA Flavonoid FNS medium borderline
PITA_000071666-RA Flavonoid FNS low borderline
PITA_000072128-RA Flavonoid FNS medium borderline
PITA_000073988-RA Flavonoid FNS medium borderline
PITA_000074614-RA Flavonoid FNS medium borderline
PITA_000075473-RA Flavonoid FNS medium borderline
PITA_000076041-RA Flavonoid FNS medium borderline
PITA_000076042-RA Flavonoid FNS medium borderline
PITA_000076419-RA Flavonoid FNS medium borderline
PITA_000077262-RA Flavonoid FNS low borderline
PITA_000077638-RA Flavonoid FNS medium borderline
PITA_000079206-RA Flavonoid FNS medium borderline
PITA_000079342-RA Flavonoid FNS medium borderline
PITA_000081357-RA Flavonoid FNS medium borderline
PITA_000083049-RA Flavonoid FNS medium borderline
PITA_000083226-RA Flavonoid FNS medium borderline
PITA_000083816-RA Flavonoid FNS medium borderline
PITA_000084217-RA Flavonoid FNS low borderline
PITA_000085230-RA Flavonoid FNS medium borderline
PITA_000085984-RA Flavonoid FNS medium pass
PITA_000086320-RA Flavonoid FNS medium borderline
PITA_000086381-RA Flavonoid FNS medium borderline
PITA_000086445-RA Flavonoid FNS medium borderline
PITA_000087491-RA Flavonoid FNS medium borderline
PITA_000088095-RA Flavonoid FNS medium borderline
PITA_000089082-RA Flavonoid FNS medium borderline
PITA_000090615-RA Flavonoid FNS medium borderline
PITA_000092288-RA Flavonoid FNS medium borderline
PITA_000092869-RA Flavonoid FNS medium borderline
PITA_000093519-RA Flavonoid FNS medium borderline
PITA_000094047-RA Flavonoid FNS medium borderline
PITA_000095733-RA Flavonoid FNS medium borderline