PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
PITA_000058194-RA Alkaloid G8O/G8H low borderline
PITA_000058409-RA Alkaloid G8O/G8H low borderline
PITA_000058988-RA Alkaloid G8O/G8H medium borderline
PITA_000058990-RA Alkaloid G8O/G8H medium borderline
PITA_000059418-RA Alkaloid G8O/G8H medium borderline
PITA_000059798-RA Alkaloid G8O/G8H low borderline
PITA_000059947-RA Alkaloid G8O/G8H low borderline
PITA_000059993-RA Alkaloid G8O/G8H medium borderline
PITA_000060494-RA Alkaloid G8O/G8H medium borderline
PITA_000060496-RA Alkaloid G8O/G8H medium borderline
PITA_000060831-RA Alkaloid G8O/G8H medium borderline
PITA_000060835-RA Alkaloid G8O/G8H medium borderline
PITA_000060836-RA Alkaloid G8O/G8H medium borderline
PITA_000061060-RA Alkaloid G8O/G8H medium borderline
PITA_000061415-RA Alkaloid G8O/G8H low borderline
PITA_000061416-RA Alkaloid G8O/G8H medium borderline
PITA_000062096-RA Alkaloid G8O/G8H low borderline
PITA_000062098-RA Alkaloid G8O/G8H low borderline
PITA_000062408-RA Alkaloid G8O/G8H medium borderline
PITA_000062529-RA Alkaloid G8O/G8H medium pass
PITA_000062884-RA Alkaloid G8O/G8H low borderline
PITA_000063320-RA Alkaloid G8O/G8H medium borderline
PITA_000063324-RA Alkaloid G8O/G8H medium borderline
PITA_000064036-RA Alkaloid G8O/G8H medium borderline
PITA_000064287-RA Alkaloid G8O/G8H medium borderline
PITA_000064714-RA Alkaloid G8O/G8H medium borderline
PITA_000065709-RA Alkaloid G8O/G8H low borderline
PITA_000065711-RA Alkaloid G8O/G8H medium borderline
PITA_000065815-RA Alkaloid G8O/G8H medium borderline
PITA_000066018-RA Alkaloid G8O/G8H low borderline
PITA_000066506-RA Alkaloid G8O/G8H medium borderline
PITA_000066648-RA Alkaloid G8O/G8H medium borderline
PITA_000067340-RA Alkaloid G8O/G8H medium borderline
PITA_000067654-RA Alkaloid G8O/G8H low borderline
PITA_000067882-RA Alkaloid G8O/G8H low borderline
PITA_000068394-RA Alkaloid G8O/G8H medium borderline
PITA_000068747-RA Alkaloid G8O/G8H low borderline
PITA_000068974-RA Alkaloid G8O/G8H low borderline
PITA_000069067-RA Alkaloid G8O/G8H low borderline
PITA_000069089-RA Alkaloid G8O/G8H medium borderline
PITA_000069199-RA Alkaloid G8O/G8H medium pass
PITA_000069478-RA Alkaloid G8O/G8H medium borderline
PITA_000070154-RA Alkaloid G8O/G8H medium borderline
PITA_000070368-RA Alkaloid G8O/G8H medium borderline
PITA_000070508-RA Alkaloid G8O/G8H medium borderline
PITA_000070937-RA Alkaloid G8O/G8H low borderline
PITA_000070945-RA Alkaloid G8O/G8H medium borderline
PITA_000071576-RA Alkaloid G8O/G8H medium borderline
PITA_000071640-RA Alkaloid G8O/G8H low borderline
PITA_000071939-RA Alkaloid G8O/G8H low borderline