PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000072128-RA Alkaloid G8O/G8H medium borderline
PITA_000072227-RA Alkaloid G8O/G8H medium borderline
PITA_000072357-RA Alkaloid G8O/G8H low borderline
PITA_000072637-RA Alkaloid G8O/G8H medium borderline
PITA_000073006-RA Alkaloid G8O/G8H medium borderline
PITA_000074204-RA Alkaloid G8O/G8H medium borderline
PITA_000074614-RA Alkaloid G8O/G8H low borderline
PITA_000074708-RA Alkaloid G8O/G8H medium borderline
PITA_000074800-RA Alkaloid G8O/G8H medium borderline
PITA_000074888-RA Alkaloid G8O/G8H low borderline
PITA_000075604-RA Alkaloid G8O/G8H medium borderline
PITA_000075839-RA Alkaloid G8O/G8H medium borderline
PITA_000076041-RA Alkaloid G8O/G8H medium pass
PITA_000076419-RA Alkaloid G8O/G8H medium pass
PITA_000076444-RA Alkaloid G8O/G8H low borderline
PITA_000076511-RA Alkaloid G8O/G8H low borderline
PITA_000076682-RA Alkaloid G8O/G8H medium borderline
PITA_000076829-RA Alkaloid G8O/G8H medium pass
PITA_000077296-RA Alkaloid G8O/G8H medium borderline
PITA_000078537-RA Alkaloid G8O/G8H medium borderline
PITA_000078538-RA Alkaloid G8O/G8H medium borderline
PITA_000078589-RA Alkaloid G8O/G8H medium borderline
PITA_000078969-RA Alkaloid G8O/G8H medium borderline
PITA_000079579-RA Alkaloid G8O/G8H medium borderline
PITA_000080006-RA Alkaloid G8O/G8H medium borderline
PITA_000080007-RA Alkaloid G8O/G8H medium borderline
PITA_000080176-RA Alkaloid G8O/G8H medium borderline
PITA_000081211-RA Alkaloid G8O/G8H medium borderline
PITA_000081243-RA Alkaloid G8O/G8H medium pass
PITA_000081358-RA Alkaloid G8O/G8H medium borderline
PITA_000081720-RA Alkaloid G8O/G8H medium borderline
PITA_000081721-RA Alkaloid G8O/G8H medium borderline
PITA_000081786-RA Alkaloid G8O/G8H low borderline
PITA_000083816-RA Alkaloid G8O/G8H medium borderline
PITA_000084007-RA Alkaloid G8O/G8H low borderline
PITA_000084045-RA Alkaloid G8O/G8H medium borderline
PITA_000084135-RA Alkaloid G8O/G8H medium borderline
PITA_000084833-RA Alkaloid G8O/G8H medium borderline
PITA_000086445-RA Alkaloid G8O/G8H low borderline
PITA_000086846-RA Alkaloid G8O/G8H low borderline
PITA_000086848-RA Alkaloid G8O/G8H low borderline
PITA_000087122-RA Alkaloid G8O/G8H medium borderline
PITA_000087463-RA Alkaloid G8O/G8H medium borderline
PITA_000088153-RA Alkaloid G8O/G8H low borderline
PITA_000088290-RA Alkaloid G8O/G8H medium borderline
PITA_000088292-RA Alkaloid G8O/G8H low borderline
PITA_000088609-RA Alkaloid G8O/G8H medium borderline
PITA_000089082-RA Alkaloid G8O/G8H low borderline
PITA_000089206-RA Alkaloid G8O/G8H low borderline
PITA_000089328-RA Alkaloid G8O/G8H medium borderline