PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
PITA_000065036-RA Alkaloid GES low borderline GES__00009__sp_Q8GUE4_GERS_CINTE
PITA_000067102-RA Alkaloid GES low borderline GES__00005__sp_Q308N0_GRNL6_PERFR
PITA_000067795-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000067884-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000067885-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000067909-RA Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000068311-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000068640-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000070083-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000070115-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000070697-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000070698-RA Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
PITA_000070819-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000070820-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000071074-RA Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000071150-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000071802-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000072087-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000072088-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000072122-RA Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000072123-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000073304-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000073505-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000073628-RA Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
PITA_000073888-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000073941-RA Alkaloid GES medium borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000074056-RA Alkaloid GES low borderline GES__00002__sp_C0KWV4_GRNLG_PERFH
PITA_000074983-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075203-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075777-RA Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075778-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075921-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075922-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000075965-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000076002-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000076003-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000077719-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000078302-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000078444-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000078715-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000078788-RA Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000078947-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000079471-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000079854-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080108-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080199-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080390-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080607-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080668-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PITA_000080767-RA Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN