PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
PITA_000065548-RA Flavonoid IFR medium pass
PITA_000065822-RA Flavonoid IFR medium pass
PITA_000065890-RA Flavonoid IFR medium pass
PITA_000066057-RA Flavonoid IFR low borderline
PITA_000067252-RA Flavonoid IFR high pass
PITA_000067499-RA Flavonoid IFR medium pass
PITA_000067590-RA Flavonoid IFR high pass
PITA_000068997-RA Flavonoid IFR low borderline
PITA_000069096-RA Flavonoid IFR high pass
PITA_000069108-RA Flavonoid IFR low borderline
PITA_000069112-RA Flavonoid IFR medium pass
PITA_000069838-RA Flavonoid IFR medium pass
PITA_000071530-RA Flavonoid IFR high pass
PITA_000071884-RA Flavonoid IFR low borderline
PITA_000072640-RA Flavonoid IFR medium pass
PITA_000073917-RA Flavonoid IFR low borderline
PITA_000074032-RA Flavonoid IFR low borderline
PITA_000074033-RA Flavonoid IFR low borderline
PITA_000074095-RA Flavonoid IFR high pass
PITA_000074207-RA Flavonoid IFR high pass
PITA_000074380-RA Flavonoid IFR low borderline
PITA_000074767-RA Flavonoid IFR low borderline
PITA_000075008-RA Flavonoid IFR low borderline
PITA_000075798-RA Flavonoid IFR low borderline
PITA_000076032-RA Flavonoid IFR low borderline
PITA_000076064-RA Flavonoid IFR high pass
PITA_000076143-RA Flavonoid IFR high pass
PITA_000076267-RA Flavonoid IFR low borderline
PITA_000076321-RA Flavonoid IFR medium pass
PITA_000076817-RA Flavonoid IFR high pass
PITA_000078365-RA Flavonoid IFR high pass
PITA_000078448-RA Flavonoid IFR low borderline
PITA_000078582-RA Flavonoid IFR low borderline
PITA_000078583-RA Flavonoid IFR medium pass
PITA_000078584-RA Flavonoid IFR high pass
PITA_000078883-RA Flavonoid IFR high pass
PITA_000079011-RA Flavonoid IFR medium pass
PITA_000079444-RA Flavonoid IFR low borderline
PITA_000079961-RA Flavonoid IFR low borderline
PITA_000080388-RA Flavonoid IFR high pass
PITA_000080829-RA Flavonoid IFR medium pass
PITA_000081857-RA Flavonoid IFR low borderline
PITA_000082643-RA Flavonoid IFR high pass
PITA_000083123-RA Flavonoid IFR low borderline
PITA_000083481-RA Flavonoid IFR medium pass
PITA_000083667-RA Flavonoid IFR low borderline
PITA_000083714-RA Flavonoid IFR medium pass
PITA_000084128-RA Flavonoid IFR medium pass
PITA_000085541-RA Flavonoid IFR medium pass
PITA_000085924-RA Flavonoid IFR medium pass