PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Protein/Isoform Record Pathway Family Confidence Status
PITA_000086015-RA Flavonoid IFR high pass
PITA_000086779-RA Flavonoid IFR medium pass
PITA_000087043-RA Flavonoid IFR medium pass
PITA_000087078-RA Flavonoid IFR medium pass
PITA_000087333-RA Flavonoid IFR high pass
PITA_000087451-RA Flavonoid IFR medium pass
PITA_000087642-RA Flavonoid IFR low borderline
PITA_000087796-RA Flavonoid IFR medium pass
PITA_000087797-RA Flavonoid IFR medium pass
PITA_000088260-RA Flavonoid IFR low borderline
PITA_000088336-RA Flavonoid IFR low borderline
PITA_000088673-RA Flavonoid IFR medium pass
PITA_000088988-RA Flavonoid IFR low borderline
PITA_000089299-RA Flavonoid IFR medium pass
PITA_000089364-RA Flavonoid IFR low borderline
PITA_000090360-RA Flavonoid IFR low borderline
PITA_000091347-RA Flavonoid IFR medium pass
PITA_000091382-RA Flavonoid IFR medium pass
PITA_000091616-RA Flavonoid IFR high pass
PITA_000091662-RA Flavonoid IFR high pass
PITA_000091749-RA Flavonoid IFR high pass
PITA_000092076-RA Flavonoid IFR low borderline
PITA_000092446-RA Flavonoid IFR high pass
PITA_000093128-RA Flavonoid IFR low borderline
PITA_000093648-RA Flavonoid IFR medium pass
PITA_000093935-RA Flavonoid IFR high pass
PITA_000093977-RA Flavonoid IFR medium pass
PITA_000093978-RA Flavonoid IFR medium pass
PITA_000094435-RA Flavonoid IFR low borderline
PITA_000094541-RA Flavonoid IFR low borderline
PITA_000096256-RA Flavonoid IFR low borderline
PITA_000096285-RA Flavonoid IFR medium pass
PITA_000096485-RA Flavonoid IFR low borderline
PITAhm_000026-RA Flavonoid IFR high pass
PITAhm_000461-RA Flavonoid IFR low borderline
PITAhm_002442-RA Flavonoid IFR high pass
PITAhm_002682-RA Flavonoid IFR low borderline
PITAhm_002971-RA Flavonoid IFR low borderline
PITAhm_003132-RA Flavonoid IFR high pass