PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
PITA_000015650-RA Flavonoid IFS medium borderline
PITA_000015787-RA Flavonoid IFS low borderline
PITA_000015915-RA Flavonoid IFS low borderline
PITA_000015916-RA Flavonoid IFS low borderline
PITA_000016127-RA Flavonoid IFS medium borderline
PITA_000017562-RA Flavonoid IFS low borderline
PITA_000019446-RA Flavonoid IFS medium borderline
PITA_000020060-RA Flavonoid IFS low borderline
PITA_000020566-RA Flavonoid IFS low borderline
PITA_000020567-RA Flavonoid IFS low borderline
PITA_000020637-RA Flavonoid IFS low borderline
PITA_000021078-RA Flavonoid IFS low borderline
PITA_000021926-RA Flavonoid IFS low borderline
PITA_000022033-RA Flavonoid IFS low borderline
PITA_000022231-RA Flavonoid IFS medium borderline
PITA_000022455-RA Flavonoid IFS medium borderline
PITA_000022456-RA Flavonoid IFS medium borderline
PITA_000022846-RA Flavonoid IFS low borderline
PITA_000023275-RA Flavonoid IFS low borderline
PITA_000023499-RA Flavonoid IFS medium borderline
PITA_000023808-RA Flavonoid IFS medium borderline
PITA_000024090-RA Flavonoid IFS medium borderline
PITA_000024091-RA Flavonoid IFS medium borderline
PITA_000024813-RA Flavonoid IFS medium borderline
PITA_000025076-RA Flavonoid IFS low borderline
PITA_000025223-RA Flavonoid IFS low borderline
PITA_000025224-RA Flavonoid IFS low borderline
PITA_000025413-RA Flavonoid IFS low borderline
PITA_000025722-RA Flavonoid IFS medium borderline
PITA_000025907-RA Flavonoid IFS medium borderline
PITA_000026028-RA Flavonoid IFS low borderline
PITA_000026664-RA Flavonoid IFS low borderline
PITA_000026745-RA Flavonoid IFS low borderline
PITA_000026842-RA Flavonoid IFS low borderline
PITA_000027819-RA Flavonoid IFS medium borderline
PITA_000028489-RA Flavonoid IFS medium borderline
PITA_000028490-RA Flavonoid IFS medium borderline
PITA_000029032-RA Flavonoid IFS low borderline
PITA_000029439-RA Flavonoid IFS low borderline
PITA_000029776-RA Flavonoid IFS low borderline
PITA_000029785-RA Flavonoid IFS medium borderline
PITA_000029793-RA Flavonoid IFS low borderline
PITA_000030532-RA Flavonoid IFS low borderline
PITA_000030719-RA Flavonoid IFS medium borderline
PITA_000030987-RA Flavonoid IFS low borderline
PITA_000031001-RA Flavonoid IFS low borderline
PITA_000031065-RA Flavonoid IFS low borderline
PITA_000031833-RA Flavonoid IFS medium borderline
PITA_000032176-RA Flavonoid IFS medium borderline
PITA_000032240-RA Flavonoid IFS low borderline