PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
PITA_000050796-RA Flavonoid IFS low borderline
PITA_000050797-RA Flavonoid IFS low borderline
PITA_000050800-RA Flavonoid IFS medium borderline
PITA_000050806-RA Flavonoid IFS low borderline
PITA_000050878-RA Flavonoid IFS low borderline
PITA_000051239-RA Flavonoid IFS low borderline
PITA_000051367-RA Flavonoid IFS low borderline
PITA_000051433-RA Flavonoid IFS medium borderline
PITA_000051443-RA Flavonoid IFS low borderline
PITA_000051658-RA Flavonoid IFS low borderline
PITA_000051675-RA Flavonoid IFS medium borderline
PITA_000051869-RA Flavonoid IFS medium borderline
PITA_000052145-RA Flavonoid IFS low borderline
PITA_000052421-RA Flavonoid IFS low borderline
PITA_000052530-RA Flavonoid IFS low borderline
PITA_000052592-RA Flavonoid IFS low borderline
PITA_000052927-RA Flavonoid IFS low borderline
PITA_000052928-RA Flavonoid IFS low borderline
PITA_000053114-RA Flavonoid IFS medium borderline
PITA_000053270-RA Flavonoid IFS medium borderline
PITA_000053894-RA Flavonoid IFS low borderline
PITA_000053952-RA Flavonoid IFS medium borderline
PITA_000054285-RA Flavonoid IFS low borderline
PITA_000054344-RA Flavonoid IFS low borderline
PITA_000054409-RA Flavonoid IFS medium borderline
PITA_000054547-RA Flavonoid IFS low borderline
PITA_000054791-RA Flavonoid IFS low borderline
PITA_000055498-RA Flavonoid IFS low borderline
PITA_000055517-RA Flavonoid IFS medium borderline
PITA_000055788-RA Flavonoid IFS low borderline
PITA_000055794-RA Flavonoid IFS low borderline
PITA_000055813-RA Flavonoid IFS medium borderline
PITA_000057114-RA Flavonoid IFS low borderline
PITA_000057115-RA Flavonoid IFS medium borderline
PITA_000057135-RA Flavonoid IFS medium borderline
PITA_000057147-RA Flavonoid IFS low borderline
PITA_000057180-RA Flavonoid IFS low borderline
PITA_000057181-RA Flavonoid IFS medium borderline
PITA_000057462-RA Flavonoid IFS medium borderline
PITA_000057544-RA Flavonoid IFS low borderline
PITA_000057948-RA Flavonoid IFS low borderline
PITA_000058072-RA Flavonoid IFS low borderline
PITA_000058194-RA Flavonoid IFS low borderline
PITA_000058201-RA Flavonoid IFS low borderline
PITA_000058385-RA Flavonoid IFS medium borderline
PITA_000058398-RA Flavonoid IFS low borderline
PITA_000058735-RA Flavonoid IFS low borderline
PITA_000058857-RA Flavonoid IFS medium borderline
PITA_000058864-RA Flavonoid IFS low borderline
PITA_000058968-RA Flavonoid IFS low borderline