PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
PITA_000074632-RA Alkaloid IO low borderline
PITA_000075416-RA Alkaloid IO medium borderline
PITA_000075461-RA Alkaloid IO medium borderline
PITA_000075887-RA Alkaloid IO low borderline
PITA_000076096-RA Alkaloid IO medium borderline
PITA_000077664-RA Alkaloid IO medium borderline
PITA_000078315-RA Alkaloid IO medium borderline
PITA_000078716-RA Alkaloid IO medium borderline
PITA_000079019-RA Alkaloid IO low borderline
PITA_000079205-RA Alkaloid IO low borderline
PITA_000080128-RA Alkaloid IO medium borderline
PITA_000081550-RA Alkaloid IO medium borderline
PITA_000081593-RA Alkaloid IO medium borderline
PITA_000082167-RA Alkaloid IO low borderline
PITA_000082590-RA Alkaloid IO low borderline
PITA_000082899-RA Alkaloid IO medium borderline
PITA_000082967-RA Alkaloid IO medium borderline
PITA_000083176-RA Alkaloid IO low borderline
PITA_000083594-RA Alkaloid IO medium borderline
PITA_000083697-RA Alkaloid IO low borderline
PITA_000084060-RA Alkaloid IO low borderline
PITA_000084577-RA Alkaloid IO medium borderline
PITA_000084671-RA Alkaloid IO low borderline
PITA_000085230-RA Alkaloid IO medium borderline
PITA_000085267-RA Alkaloid IO medium borderline
PITA_000085566-RA Alkaloid IO medium borderline
PITA_000085567-RA Alkaloid IO medium borderline
PITA_000086235-RA Alkaloid IO medium borderline
PITA_000086815-RA Alkaloid IO low borderline
PITA_000086845-RA Alkaloid IO low borderline
PITA_000087766-RA Alkaloid IO medium borderline
PITA_000087950-RA Alkaloid IO medium borderline
PITA_000088094-RA Alkaloid IO low borderline
PITA_000088453-RA Alkaloid IO medium borderline
PITA_000088682-RA Alkaloid IO low borderline
PITA_000089561-RA Alkaloid IO medium borderline
PITA_000089675-RA Alkaloid IO medium borderline
PITA_000091079-RA Alkaloid IO low borderline
PITA_000091087-RA Alkaloid IO medium borderline
PITA_000091254-RA Alkaloid IO medium borderline
PITA_000091281-RA Alkaloid IO low borderline
PITA_000093021-RA Alkaloid IO medium borderline
PITA_000093243-RA Alkaloid IO low borderline
PITA_000093359-RA Alkaloid IO low borderline
PITA_000093616-RA Alkaloid IO medium borderline
PITA_000093954-RA Alkaloid IO medium pass
PITA_000094231-RA Alkaloid IO medium borderline
PITA_000094754-RA Alkaloid IO low borderline
PITA_000095437-RA Alkaloid IO medium borderline
PITA_000095452-RA Alkaloid IO medium borderline