PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status
PITA_000050977-RA Phenylpropanoid LAC medium pass
PITA_000050978-RA Phenylpropanoid LAC medium pass
PITA_000051026-RA Phenylpropanoid LAC medium pass
PITA_000051698-RA Phenylpropanoid LAC medium pass
PITA_000052748-RA Phenylpropanoid LAC medium pass
PITA_000052750-RA Phenylpropanoid LAC low borderline
PITA_000053190-RA Phenylpropanoid LAC low borderline
PITA_000053202-RA Phenylpropanoid LAC medium pass
PITA_000053410-RA Phenylpropanoid LAC medium pass
PITA_000053786-RA Phenylpropanoid LAC medium pass
PITA_000054288-RA Phenylpropanoid LAC medium pass
PITA_000054328-RA Phenylpropanoid LAC medium pass
PITA_000055267-RA Phenylpropanoid LAC low borderline
PITA_000055716-RA Phenylpropanoid LAC medium pass
PITA_000055742-RA Phenylpropanoid LAC medium pass
PITA_000056258-RA Phenylpropanoid LAC medium pass
PITA_000056569-RA Phenylpropanoid LAC medium pass
PITA_000057269-RA Phenylpropanoid LAC medium pass
PITA_000057485-RA Phenylpropanoid LAC medium pass
PITA_000058148-RA Phenylpropanoid LAC medium pass
PITA_000058554-RA Phenylpropanoid LAC medium pass
PITA_000058556-RA Phenylpropanoid LAC medium pass
PITA_000059086-RA Phenylpropanoid LAC medium pass
PITA_000059087-RA Phenylpropanoid LAC medium pass
PITA_000061076-RA Phenylpropanoid LAC medium pass
PITA_000061322-RA Phenylpropanoid LAC medium pass
PITA_000062831-RA Phenylpropanoid LAC medium pass
PITA_000064183-RA Phenylpropanoid LAC medium pass
PITA_000064622-RA Phenylpropanoid LAC medium pass
PITA_000064728-RA Phenylpropanoid LAC low borderline
PITA_000064729-RA Phenylpropanoid LAC medium pass
PITA_000064730-RA Phenylpropanoid LAC medium pass
PITA_000065259-RA Phenylpropanoid LAC medium pass
PITA_000066272-RA Phenylpropanoid LAC medium pass
PITA_000067032-RA Phenylpropanoid LAC medium pass
PITA_000067097-RA Phenylpropanoid LAC medium pass
PITA_000067380-RA Phenylpropanoid LAC medium pass
PITA_000068903-RA Phenylpropanoid LAC medium pass
PITA_000070102-RA Phenylpropanoid LAC medium pass
PITA_000070103-RA Phenylpropanoid LAC medium pass
PITA_000070424-RA Phenylpropanoid LAC medium pass
PITA_000071156-RA Phenylpropanoid LAC medium pass
PITA_000071196-RA Phenylpropanoid LAC medium pass
PITA_000071197-RA Phenylpropanoid LAC medium pass
PITA_000071337-RA Phenylpropanoid LAC medium pass
PITA_000072411-RA Phenylpropanoid LAC medium pass
PITA_000073090-RA Phenylpropanoid LAC low borderline
PITA_000073205-RA Phenylpropanoid LAC medium pass
PITA_000073257-RA Phenylpropanoid LAC medium pass
PITA_000073479-RA Phenylpropanoid LAC medium pass