PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PITA_000073593-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000073802-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000073803-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000074862-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000075096-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000075277-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000075278-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000076300-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000076301-RA Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
PITA_000076644-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000076727-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000077319-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000077534-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000078773-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000079118-RA Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
PITA_000079331-RA Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
PITA_000079450-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000080468-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000080659-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000080660-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000080697-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000080762-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000080763-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000080764-RA Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
PITA_000081634-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000081665-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000082247-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000082591-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000082613-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000083120-RA Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
PITA_000083121-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000083425-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000083515-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000083527-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000083849-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000083850-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000086176-RA Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
PITA_000086177-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
PITA_000086781-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000086983-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000086984-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000087398-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000087428-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000087687-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000087737-RA Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
PITA_000087760-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000087761-RA Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
PITA_000088012-RA Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
PITA_000088468-RA Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
PITA_000088494-RA Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH